RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TAF6LQ9Y6J9 622 aa13.01□□□□□ -0.33
APTX-209ENST00000460940 TNKSO95271 1327 aa13□□□□□ -0.33
APTX-209ENST00000460940 COG2Q14746 738 aa13□□□□□ -0.33
APTX-209ENST00000460940 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
APTX-209ENST00000460940 FAM83BQ5T0W9 1011 aa13□□□□□ -0.33
APTX-209ENST00000460940 SLFN13Q68D06 897 aa13□□□□□ -0.33
APTX-209ENST00000460940 RCSD1Q6JBY9 416 aa13□□□□□ -0.33
APTX-209ENST00000460940 MB21D2Q8IYB1 491 aaPredicted RBP13□□□□□ -0.33
APTX-209ENST00000460940 NKX2-3Q8TAU0 364 aa13□□□□□ -0.33
APTX-209ENST00000460940 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
APTX-209ENST00000460940 HOXC10Q9NYD6 342 aa13□□□□□ -0.33
APTX-209ENST00000460940 SPDYE16A6NNV3 312 aaPredicted RBP12.99□□□□□ -0.33
APTX-209ENST00000460940 FLOT1O75955 427 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 HSPA4P34932 840 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 LACTBP83111 547 aaPredicted RBP12.99□□□□□ -0.33
APTX-209ENST00000460940 KIF22Q14807 665 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 MB21D1Q8N884 522 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 ENAHQ8N8S7 591 aaPredicted RBP12.99□□□□□ -0.33
APTX-209ENST00000460940 DCAF4Q8WV16 495 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 KCNB2Q92953 911 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 ERICH2A1L162 156 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 HSP90AA1P07900 732 aaKnown RBP12.99□□□□□ -0.33
APTX-209ENST00000460940 BMP3P12645 472 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 MCCP23508 829 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 DSG3P32926 999 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 SLC1A4P43007 532 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 CYB5R4Q7L1T6 521 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 ANKRD13CQ8N6S4 541 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 KAT14Q9H8E8 782 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 FEM1BQ9UK73 627 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 PPP1R9AQ9ULJ8 1098 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 RABGAP1Q9Y3P9 1069 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 A0A0G2JMZ2 1700 aa12.99□□□□□ -0.33
APTX-209ENST00000460940 GNRH1P01148 92 aa12.98□□□□□ -0.33
APTX-209ENST00000460940 MCM5P33992 734 aa12.98□□□□□ -0.33
APTX-209ENST00000460940 IFIT1BQ5T764 474 aaKnown RBP12.98□□□□□ -0.33
APTX-209ENST00000460940 CTU1Q7Z7A3 348 aaKnown RBP12.98□□□□□ -0.33
APTX-209ENST00000460940 GPRC5AQ8NFJ5 357 aa12.98□□□□□ -0.33
APTX-209ENST00000460940 NUP88Q99567 741 aaPredicted RBP12.98□□□□□ -0.33
APTX-209ENST00000460940 SLF1Q9BQI6 1058 aa12.98□□□□□ -0.33
APTX-209ENST00000460940 WDR19Q8NEZ3 1342 aa12.98□□□□□ -0.33
APTX-209ENST00000460940 PLA2G6O60733 806 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 CLCN1P35523 988 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 SEC23AQ15436 765 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 FAM160B2Q86V87 743 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 CD99L2Q8TCZ2 262 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 RBPJLQ9UBG7 517 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 CASP8AP2Q9UKL3 1982 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 IFIT3O14879 490 aaKnown RBP12.97□□□□□ -0.33
APTX-209ENST00000460940 HMGB1P09429 215 aaKnown RBP12.97□□□□□ -0.33
APTX-209ENST00000460940 SNHG28P0DPA3 235 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 STAT2P52630 851 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 FCGRTP55899 365 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 ANTXR2P58335 489 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 ERVK-9P63128 1117 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 ERVK-24P63145 666 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 CCNA1P78396 465 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 PRPF38AQ8NAV1 312 aaKnown RBP12.97□□□□□ -0.33
APTX-209ENST00000460940 TMEM87BQ96K49 555 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 USP26Q9BXU7 913 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 TXNRD2Q9NNW7 524 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 ADAMTS5Q9UNA0 930 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 RLFQ13129 1914 aa12.97□□□□□ -0.33
APTX-209ENST00000460940 PARP14Q460N5 1801 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 PRC1O43663 620 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 FDX1P10109 184 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 PDHBP11177 359 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 WTAPQ15007 396 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 PKN2Q16513 984 aaKnown RBP12.96□□□□□ -0.33
APTX-209ENST00000460940 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 TMEM67Q5HYA8 995 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 CHURC1Q8WUH1 139 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 ATG4CQ96DT6 458 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 NEK1Q96PY6 1258 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 PAGR1Q9BTK6 254 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 EFCC1Q9HA90 598 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 FBXO28Q9NVF7 368 aa12.96□□□□□ -0.33
APTX-209ENST00000460940 ISY1Q9ULR0 285 aaKnown RBP12.96□□□□□ -0.33
APTX-209ENST00000460940 TMEM232C9JQI7 657 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 VWA5AO00534 786 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 CNMDO75829 334 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 PRMT2P55345 433 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 GPATCH4Q5T3I0 446 aaKnown RBP12.95□□□□□ -0.34
APTX-209ENST00000460940 SNX14Q9Y5W7 946 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 HOXD10P28358 340 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 MAPK4P31152 587 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 COPB2P35606 906 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 PSMC4P43686 418 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 ZNF543Q08ER8 600 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 IKQ13123 557 aaPredicted RBP12.95□□□□□ -0.34
APTX-209ENST00000460940 ASPRV1Q53RT3 343 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 POTEEQ6S8J3 1075 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 KCTD1Q719H9 257 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 OTOP1Q7RTM1 612 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 TMTC2Q8N394 836 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
APTX-209ENST00000460940 TRIM47Q96LD4 638 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms