RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 SEPT6Q14141 434 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 TNNI3KQ59H18 835 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 ZNF746Q6NUN9 644 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-202ENST00000460925 Q6ZNB5 142 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 ANKS3Q6ZW76 656 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 LRP10Q7Z4F1 713 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 CCDC146Q8IYE0 955 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 RBBP8NLQ8NC74 664 aaPredicted RBP6.42□□□□□ -1.38
SF3A3-202ENST00000460925 OR6P1Q8NGX9 317 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 FBXO27Q8NI29 283 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 CPLX3Q8WVH0 158 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 NRSN2Q9GZP1 204 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 EHMT1Q9H9B1 1298 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 OSGEPQ9NPF4 335 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 SPATA31A6Q5VVP1 1343 aa6.42□□□□□ -1.38
SF3A3-202ENST00000460925 BCL9LQ86UU0 1499 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 MEGF6O75095 1541 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 GLI3P10071 1580 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 DIAPH1O60610 1272 aaKnown RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 ATE1O95260 518 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 IL13P35225 146 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 DEKP35659 375 aaKnown RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 RPL6Q02878 288 aaKnown RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 SRSF11Q05519 484 aaKnown RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 ILDR2Q71H61 639 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 IL22RA1Q8N6P7 574 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 JARID2Q92833 1246 aaPredicted RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 PRDM6Q9NQX0 595 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 KRT82Q9NSB4 513 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 ZNRF3Q9ULT6 936 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 PPME1Q9Y570 386 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 MRVI1Q9Y6F6 885 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 AFF2P51816 1311 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 PARP4Q9UKK3 1724 aaKnown RBP6.41□□□□□ -1.38
SF3A3-202ENST00000460925 BRWD3Q6RI45 1802 aa6.41□□□□□ -1.38
SF3A3-202ENST00000460925 LRRC37A3O60309 1634 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 PKD1L3Q7Z443 1732 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 CCER2I3L3R5 266 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 K7ELQ4 463 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 TLR3O15455 904 aaKnown RBP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 BPNT1O95861 308 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 CYP11A1P05108 521 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 U2AF1L5P0DN76 240 aaPredicted RBP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 AFF1P51825 1210 aaKnown RBP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 U2AF1Q01081 240 aaKnown RBP eCLIP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 WDR43Q15061 677 aaKnown RBP eCLIP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 CFAP53Q96M91 514 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 YTHDC1Q96MU7 727 aaKnown RBP6.4□□□□□ -1.38
SF3A3-202ENST00000460925 CBX8Q9HC52 389 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 BRMS1Q9HCU9 246 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 LRRC4BQ9NT99 713 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 ADAMTS8Q9UP79 889 aa6.4□□□□□ -1.38
SF3A3-202ENST00000460925 IGSF1Q8N6C5 1336 aa6.4□□□□□ -1.39
SF3A3-202ENST00000460925 NCAPD2Q15021 1401 aa6.4□□□□□ -1.39
SF3A3-202ENST00000460925 KAT6BQ8WYB5 2073 aa6.4□□□□□ -1.39
SF3A3-202ENST00000460925 CLSTN1O94985 981 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 ARL4DP49703 201 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 PTPN11Q06124 597 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-202ENST00000460925 C19orf57Q0VDD7 668 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 RNFT1Q5M7Z0 435 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 SULT6B1Q6IMI4 303 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 TOM1L2Q6ZVM7 507 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 PNISRQ8TF01 805 aaKnown RBP6.39□□□□□ -1.39
SF3A3-202ENST00000460925 NUDT8Q8WV74 236 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 ANAPC16Q96DE5 110 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 COL25A1Q9BXS0 654 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-202ENST00000460925 JPH1Q9HDC5 661 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-202ENST00000460925 NAP1L2Q9ULW6 460 aaPredicted RBP6.39□□□□□ -1.39
SF3A3-202ENST00000460925 TACC3Q9Y6A5 838 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 WDR17Q8IZU2 1322 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 KIF24Q5T7B8 1368 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 CRB1P82279 1406 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 TOGARAM1Q9Y4F4 1720 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 EP400Q96L91 3159 aa6.39□□□□□ -1.39
SF3A3-202ENST00000460925 GFRA2O00451 464 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 TM4SF5O14894 197 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 LILRB5O75023 590 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 ALBP02768 609 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 SELPP16109 830 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 PRKAR2BP31323 418 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 EVA1CP58658 441 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 GSTM4Q03013 218 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 BMS1Q14692 1282 aaKnown RBP6.38□□□□□ -1.39
SF3A3-202ENST00000460925 FAM117BQ6P1L5 589 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 TEX2Q8IWB9 1127 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 HNRNPLLQ8WVV9 542 aaKnown RBP6.38□□□□□ -1.39
SF3A3-202ENST00000460925 MRFAP1L1Q96HT8 127 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 FERD3LQ96RJ6 166 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 CRBNQ96SW2 442 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 TRIM55Q9BYV6 548 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 USP21Q9UK80 565 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 POLR3KQ9Y2Y1 108 aaPredicted RBP6.38□□□□□ -1.39
SF3A3-202ENST00000460925 RRP7AQ9Y3A4 280 aaKnown RBP6.38□□□□□ -1.39
SF3A3-202ENST00000460925 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 ATRNO75882 1429 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 THSD7AQ9UPZ6 1657 aa6.38□□□□□ -1.39
SF3A3-202ENST00000460925 DOT1LQ8TEK3 1739 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms