RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 USP17L17D6RBQ6 530 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 USP17L19D6RCP7 530 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 USP17L20D6RJB6 530 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 VCAM1P19320 739 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 NT5C2P49902 561 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 USP17L24Q0WX57 530 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FBXO46Q6PJ61 603 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CASC1Q6TDU7 716 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 C17orf99Q6UX52 265 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 DSCC1Q9BVC3 393 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ASCC2Q9H1I8 757 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TOMM22Q9NS69 142 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CTNNA3Q9UI47 895 aa12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RBBP6Q7Z6E9 1792 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PLXNB2O15031 1838 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TSPY2A6NKD2 308 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 WDR46O15213 610 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PRDM1O75626 825 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FGAP02671 866 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 BCRP11274 1271 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 HOXD10P28358 340 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 GUCY1A2P33402 732 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PRMT2P55345 433 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FCGRTP55899 365 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 IMMTQ16891 758 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 BMP2KLQ5H9B9 411 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 OTOP1Q7RTM1 612 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ACER1Q8TDN7 264 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TANGO6Q9C0B7 1094 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RPAP3Q9H6T3 665 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 VCPKMTQ9H867 229 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 SYNPO2Q9UMS6 1093 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TMX2Q9Y320 296 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RLFQ13129 1914 aa12.26□□□□□ -0.45
HLA-DQB1-207ENST00000460185 SMIM22K7EJ46 135 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ZNF213O14771 459 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FOXP2O15409 715 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RAD21O60216 631 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FMNL1O95466 1100 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TTLL1O95922 423 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 EEF2P13639 858 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 HERVK_113P62684 666 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CTDSPL2Q05D32 466 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 DSG2Q14126 1118 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 MFSD6Q6ZSS7 791 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CLEC10AQ8IUN9 316 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CCAR1Q8IX12 1150 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ANKRD13CQ8N6S4 541 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ABHD8Q96I13 439 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PPP4R2Q9NY27 417 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 NYAP2Q9P242 653 aa12.25□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ORC4O43929 436 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RANBP6O60518 1105 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CHMLP26374 656 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CCNA1P78396 465 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 TFAP4Q01664 338 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 MYPNQ86TC9 1320 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 NEDD1Q8NHV4 660 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PTCD2Q8WV60 388 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CEP95Q96GE4 821 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CWC22Q9HCG8 908 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 STX8Q9UNK0 236 aa12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ZNF236Q9UL36 1845 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 A0A1W2PRG0 241 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FLOT1O75955 427 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PSMC4P43686 418 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 HAND2P61296 217 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RRP12Q5JTH9 1297 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 AKNAD1Q5T1N1 836 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CATSPERGQ6ZRH7 1159 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 KIAA1211Q6ZU35 1233 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 STAG1Q8WVM7 1258 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 ESR2Q92731 530 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 COA7Q96BR5 231 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PAGR1Q9BTK6 254 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 MTMR4Q9NYA4 1195 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 PTPN22Q9Y2R2 807 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 DOCK3Q8IZD9 2030 aa12.23□□□□□ -0.45
HLA-DQB1-207ENST00000460185 IGKV6D-41A0A0C4DH26 115 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 SGSM2O43147 1006 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 COG2Q14746 738 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FAM47AQ5JRC9 791 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 LBX2Q6XYB7 198 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 SPICE1Q8N0Z3 855 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 MB21D1Q8N884 522 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 P2RX7Q99572 595 aaKnown RBP12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CNNM2Q9H8M5 875 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 HOXC10Q9NYD6 342 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CLIP2Q9UDT6 1046 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 HPS5Q9UPZ3 1129 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 RABGAP1Q9Y3P9 1069 aa12.22□□□□□ -0.45
HLA-DQB1-207ENST00000460185 MYH6P13533 1939 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 CDC45O75419 566 aa12.21□□□□□ -0.45
HLA-DQB1-207ENST00000460185 FGRP09769 529 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms