RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 B4DLN1 442 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 MMP1P03956 469 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 ATP2B4P23634 1241 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 USH1GQ495M9 461 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 SEL1L2Q5TEA6 688 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 LCORLQ8N3X6 602 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 RPGRIP1Q96KN7 1286 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 PSMB7Q99436 277 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 SELENOSQ9BQE4 189 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 FERMT1Q9BQL6 677 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 WHAMMP3Q1A5X7 153 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 OTUD6BQ8N6M0 293 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 UBLCP1Q8WVY7 318 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-205ENST00000460170 PIGBQ92521 554 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 HOMER2Q9NSB8 354 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 EFCAB8A8MWE9 144 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 TSKSQ9UJT2 592 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 ARHGEF40Q8TER5 1519 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 SMTNP53814 917 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 BRD3Q15059 726 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 PPP1R7Q15435 360 aa16.41■□□□□ 0.22
PTPRU-205ENST00000460170 GPHNQ9NQX3 736 aaPredicted RBP16.41■□□□□ 0.22
PTPRU-205ENST00000460170 KDM3AQ9Y4C1 1321 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 FLOT1O75955 427 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 CPLX4Q7Z7G2 160 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 MYOCDQ8IZQ8 938 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 PIH1D3Q9NQM4 214 aaKnown RBP16.4■□□□□ 0.22
PTPRU-205ENST00000460170 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 CCDC25Q86WR0 208 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 TEKT1Q969V4 418 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 CEP152O94986 1710 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 GNA14O95837 355 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 BTDP43251 543 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 NR5A1Q13285 461 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 MYCT1Q8N699 235 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 ANKS4BQ8N8V4 417 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 PAIP2Q9BPZ3 127 aaKnown RBP16.4■□□□□ 0.22
PTPRU-205ENST00000460170 ABCA9Q8IUA7 1624 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 SPOPO43791 374 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
PTPRU-205ENST00000460170 CFAP221Q4G0U5 840 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 PPP1R13BQ96KQ4 1090 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 MRPL44Q9H9J2 332 aaKnown RBP16.4■□□□□ 0.22
PTPRU-205ENST00000460170 PCDHA12Q9UN75 941 aa16.4■□□□□ 0.22
PTPRU-205ENST00000460170 GCNT3O95395 438 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 CFBP00751 764 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 DYNLL1P63167 89 aaKnown RBP16.39■□□□□ 0.21
PTPRU-205ENST00000460170 CCDC121Q6ZUS5 278 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 MICALL1Q8N3F8 863 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 FAM212AQ96EL1 285 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 HAUS4Q9H6D7 363 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 OAS2P29728 719 aaKnown RBP16.39■□□□□ 0.21
PTPRU-205ENST00000460170 AIFM3Q96NN9 605 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 DCAF8L1A6NGE4 600 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 KIFAP3Q92845 792 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 PSTPIP2Q9H939 334 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 CEP83Q9Y592 693 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 CEP104O60308 925 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 FNBP1Q96RU3 617 aa16.39■□□□□ 0.21
PTPRU-205ENST00000460170 GOLGA6CA6NDK9 693 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 GOLGA6BA6NDN3 693 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 SLFN14P0C7P3 912 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 GOLGA6DP0CG33 693 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 COPB1P53618 953 aaKnown RBP16.38■□□□□ 0.21
PTPRU-205ENST00000460170 RASGRF1Q13972 1273 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 TRIM58Q8NG06 486 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 GOLGA6AQ9NYA3 693 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 USP21Q9UK80 565 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 CRB1P82279 1406 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 EXOC3O60645 756 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 ALDH1B1P30837 517 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 MCAMP43121 646 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 BIRC3Q13489 604 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 FRMPD2Q68DX3 1309 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-205ENST00000460170 H0YIN7 160 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 RPS6KA1Q15418 735 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 LRRC47Q8N1G4 583 aaKnown RBP16.38■□□□□ 0.21
PTPRU-205ENST00000460170 STRBPQ96SI9 672 aaKnown RBP16.38■□□□□ 0.21
PTPRU-205ENST00000460170 EPN1Q9Y6I3 576 aaPredicted RBP16.38■□□□□ 0.21
PTPRU-205ENST00000460170 KRT5P13647 590 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 SLFNL1Q499Z3 407 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 GPBP1Q86WP2 473 aa16.38■□□□□ 0.21
PTPRU-205ENST00000460170 ACTN4O43707 911 aaKnown RBP16.37■□□□□ 0.21
PTPRU-205ENST00000460170 LRRC45Q96CN5 670 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 IQCGQ9H095 443 aaKnown RBP16.37■□□□□ 0.21
PTPRU-205ENST00000460170 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPRU-205ENST00000460170 MAGEF1Q9HAY2 307 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 EXOC7Q9UPT5 735 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 PTPRMP28827 1452 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 CASP14P31944 242 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 PAK2Q13177 524 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 SND1Q7KZF4 910 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPRU-205ENST00000460170 MAN1B1Q9UKM7 699 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 LEMD3Q9Y2U8 911 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 RFX7Q2KHR2 1363 aa16.37■□□□□ 0.21
PTPRU-205ENST00000460170 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
PTPRU-205ENST00000460170 LAD1O00515 517 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms