RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 OTUD7AQ8TE49 926 aaPredicted RBP27.22■■□□□ 1.95
PTPN4-207ENST00000460162 FSD1Q9BTV5 496 aa27.22■■□□□ 1.95
PTPN4-207ENST00000460162 DDX20Q9UHI6 824 aaKnown RBP27.22■■□□□ 1.95
PTPN4-207ENST00000460162 ADAMTS5Q9UNA0 930 aa27.22■■□□□ 1.95
PTPN4-207ENST00000460162 NCAPG2Q86XI2 1143 aa27.21■■□□□ 1.95
PTPN4-207ENST00000460162 SLC5A4Q9NY91 659 aa27.21■■□□□ 1.95
PTPN4-207ENST00000460162 NYAP2Q9P242 653 aa27.21■■□□□ 1.95
PTPN4-207ENST00000460162 PPP1R9AQ9ULJ8 1098 aa27.21■■□□□ 1.95
PTPN4-207ENST00000460162 SALL3Q9BXA9 1300 aa27.2■■□□□ 1.95
PTPN4-207ENST00000460162 SLC25A27O95847 323 aa27.2■■□□□ 1.94
PTPN4-207ENST00000460162 CYBAP13498 195 aa27.2■■□□□ 1.94
PTPN4-207ENST00000460162 CYP2C19P33261 490 aa27.2■■□□□ 1.94
PTPN4-207ENST00000460162 TMEM132BQ14DG7 1078 aa27.2■■□□□ 1.94
PTPN4-207ENST00000460162 NACAP1Q9BZK3 213 aa27.2■■□□□ 1.94
PTPN4-207ENST00000460162 PATL2C9JE40 543 aaKnown RBP27.19■■□□□ 1.94
PTPN4-207ENST00000460162 APPP05067 770 aa27.19■■□□□ 1.94
PTPN4-207ENST00000460162 FAM83BQ5T0W9 1011 aa27.19■■□□□ 1.94
PTPN4-207ENST00000460162 SAMD1Q6SPF0 538 aaPredicted RBP27.19■■□□□ 1.94
PTPN4-207ENST00000460162 FBXO28Q9NVF7 368 aa27.19■■□□□ 1.94
PTPN4-207ENST00000460162 ZBTB47Q9UFB7 747 aaPredicted RBP27.19■■□□□ 1.94
PTPN4-207ENST00000460162 ZNFX1Q9P2E3 1918 aaKnown RBP27.19■■□□□ 1.94
PTPN4-207ENST00000460162 PLIN4Q96Q06 1357 aa27.19■■□□□ 1.94
PTPN4-207ENST00000460162 PLXNA1Q9UIW2 1896 aa27.19■■□□□ 1.94
PTPN4-207ENST00000460162 RAD21O60216 631 aa27.18■■□□□ 1.94
PTPN4-207ENST00000460162 IFNL3Q8IZI9 196 aa27.18■■□□□ 1.94
PTPN4-207ENST00000460162 STK11IPQ8N1F8 1099 aa27.18■■□□□ 1.94
PTPN4-207ENST00000460162 CRBNQ96SW2 442 aa27.18■■□□□ 1.94
PTPN4-207ENST00000460162 IGKV6D-41A0A0C4DH26 115 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 VWA5AO00534 786 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 COBLO75128 1261 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 FCER1AP12319 257 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 CNGA1P29973 690 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 COPB2P35606 906 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 ZMYM1Q5SVZ6 1142 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 RIOX2Q8IUF8 465 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 SEC62Q99442 399 aaKnown RBP27.17■■□□□ 1.94
PTPN4-207ENST00000460162 SYNPO2Q9UMS6 1093 aa27.17■■□□□ 1.94
PTPN4-207ENST00000460162 ZNF444Q8N0Y2 327 aaPredicted RBP27.16■■□□□ 1.94
PTPN4-207ENST00000460162 TRPV1Q8NER1 839 aa27.16■■□□□ 1.94
PTPN4-207ENST00000460162 ZNF214Q9UL59 606 aaPredicted RBP27.16■■□□□ 1.94
PTPN4-207ENST00000460162 HDAC1Q13547 482 aaPredicted RBP27.15■■□□□ 1.94
PTPN4-207ENST00000460162 REPS2Q8NFH8 660 aa27.15■■□□□ 1.94
PTPN4-207ENST00000460162 SLF1Q9BQI6 1058 aa27.15■■□□□ 1.94
PTPN4-207ENST00000460162 NAPBQ9H115 298 aa27.15■■□□□ 1.94
PTPN4-207ENST00000460162 ZMYND8Q9ULU4 1186 aaPredicted RBP27.15■■□□□ 1.94
PTPN4-207ENST00000460162 F5H6K3 240 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 PRDM1O75626 825 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 NDUFB10O96000 172 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 STAT3P40763 770 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 PDE4BQ07343 736 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 KLRC3Q07444 240 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 MAML3Q96JK9 1138 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 MMP19Q99542 508 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 GDF15Q99988 308 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 STAP2Q9UGK3 403 aa27.14■■□□□ 1.94
PTPN4-207ENST00000460162 DNM1LO00429 736 aa27.13■■□□□ 1.93
PTPN4-207ENST00000460162 SLC3A2P08195 630 aaKnown RBP27.13■■□□□ 1.93
PTPN4-207ENST00000460162 KCTD2Q14681 263 aa27.13■■□□□ 1.93
PTPN4-207ENST00000460162 ANKRD45Q5TZF3 282 aa27.13■■□□□ 1.93
PTPN4-207ENST00000460162 CEP95Q96GE4 821 aa27.13■■□□□ 1.93
PTPN4-207ENST00000460162 NUP88Q99567 741 aaPredicted RBP27.13■■□□□ 1.93
PTPN4-207ENST00000460162 SZT2Q5T011 3432 aa27.13■■□□□ 1.93
PTPN4-207ENST00000460162 SEPT4O43236 478 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 BMP8BP34820 402 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 PPARAQ07869 468 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 MKL1Q969V6 931 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 TEX13BQ9BXU2 312 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 MTMR4Q9NYA4 1195 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 CLIP2Q9UDT6 1046 aa27.12■■□□□ 1.93
PTPN4-207ENST00000460162 TTLL1O95922 423 aa27.11■■□□□ 1.93
PTPN4-207ENST00000460162 AAMPQ13685 434 aa27.11■■□□□ 1.93
PTPN4-207ENST00000460162 LRRC26Q2I0M4 334 aa27.11■■□□□ 1.93
PTPN4-207ENST00000460162 GMCL1P1Q8NEA9 526 aa27.11■■□□□ 1.93
PTPN4-207ENST00000460162 DIS3Q9Y2L1 958 aaKnown RBP27.11■■□□□ 1.93
PTPN4-207ENST00000460162 TSPY3P0CV98 308 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 TSPY8P0CW00 308 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 SYN1P17600 705 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 PRPF38AQ8NAV1 312 aaKnown RBP27.1■■□□□ 1.93
PTPN4-207ENST00000460162 NEDD1Q8NHV4 660 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 EVI5LQ96CN4 794 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 NRBP1Q9UHY1 535 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 LAMA3Q16787 3333 aa27.1■■□□□ 1.93
PTPN4-207ENST00000460162 ARRDC4Q8NCT1 418 aa27.09■■□□□ 1.93
PTPN4-207ENST00000460162 SENP6Q9GZR1 1112 aaPredicted RBP27.09■■□□□ 1.93
PTPN4-207ENST00000460162 ATP2A1O14983 1001 aa27.08■■□□□ 1.93
PTPN4-207ENST00000460162 FOXP2O15409 715 aa27.08■■□□□ 1.93
PTPN4-207ENST00000460162 PDE1AP54750 535 aa27.08■■□□□ 1.93
PTPN4-207ENST00000460162 SNRNP48Q6IEG0 339 aaKnown RBP27.08■■□□□ 1.93
PTPN4-207ENST00000460162 LRRC47Q8N1G4 583 aaKnown RBP27.08■■□□□ 1.93
PTPN4-207ENST00000460162 DNAH12Q6ZR08 3092 aa27.08■■□□□ 1.92
PTPN4-207ENST00000460162 PGK2P07205 417 aa27.07■■□□□ 1.92
PTPN4-207ENST00000460162 MAGEA10P43363 369 aaPredicted RBP27.07■■□□□ 1.92
PTPN4-207ENST00000460162 ZNF792Q3KQV3 632 aa27.07■■□□□ 1.92
PTPN4-207ENST00000460162 PPP4R3BQ5MIZ7 849 aa27.07■■□□□ 1.92
PTPN4-207ENST00000460162 FEM1BQ9UK73 627 aa27.07■■□□□ 1.92
PTPN4-207ENST00000460162 KBTBD13C9JR72 458 aa27.06■■□□□ 1.92
PTPN4-207ENST00000460162 CCDC129Q6ZRS4 1044 aa27.06■■□□□ 1.92
PTPN4-207ENST00000460162 TICAM2Q86XR7 235 aa27.06■■□□□ 1.92
PTPN4-207ENST00000460162 TINF2Q9BSI4 451 aa27.06■■□□□ 1.92
PTPN4-207ENST00000460162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms