RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 RNF168Q8IYW5 571 aaPredicted RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 ARMC10Q8N2F6 343 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 FAM76AQ8TAV0 307 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 SMCR8Q8TEV9 937 aaPredicted RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 ZFAND2BQ8WV99 257 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 PIK3R5Q8WYR1 880 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 TTC9Q92623 222 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 HOOK2Q96ED9 719 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 INTS4Q96HW7 963 aaKnown RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 ANKRD27Q96NW4 1050 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 DBNDD2Q9BQY9 259 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 MTA3Q9BTC8 594 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 ATP6V0A4Q9HBG4 840 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 PYCARDQ9ULZ3 195 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 NAIPQ13075 1403 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 RPRD2Q5VT52 1461 aaKnown RBP6.38□□□□□ -1.39
HMGB4-202ENST00000458277 PLB1Q6P1J6 1458 aa6.38□□□□□ -1.39
HMGB4-202ENST00000458277 RPAP1Q9BWH6 1393 aaPredicted RBP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 TTC41PQ6P2S7 1318 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 PHLPP2Q6ZVD8 1323 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 KIF3BO15066 747 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC175P0C221 793 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 UBE2HP62256 183 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 IRF5Q13568 498 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 EML3Q32P44 896 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 TBC1D25Q3MII6 688 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC181Q5TID7 509 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 DHX32Q7L7V1 743 aaKnown RBP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 OTUD6AQ7L8S5 288 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 YTHDF3Q7Z739 585 aaKnown RBP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 REXO1L1PQ8IX06 675 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 MYOCDQ8IZQ8 938 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 FAM81AQ8TBF8 368 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 JPH2Q9BR39 696 aaPredicted RBP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 UNC45AQ9H3U1 944 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 LUC7LQ9NQ29 371 aaKnown RBP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 PDRG1Q9NUG6 133 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 TUBA8Q9NY65 449 aaPredicted RBP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 GGA2Q9UJY4 613 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 NOD1Q9Y239 953 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 RIPOR2Q9Y4F9 1068 aa6.37□□□□□ -1.39
HMGB4-202ENST00000458277 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB4-202ENST00000458277 ABCC2Q92887 1545 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 USP47Q96K76 1375 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ZNF521Q96K83 1311 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 WDR33Q9C0J8 1336 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 FSBPO95073 299 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 LUC7L3O95232 432 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 HARSP12081 509 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 FERP16591 822 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ALDH1B1P30837 517 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 GJA8P48165 433 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 GCLCP48506 637 aaPredicted RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ST5P78524 1137 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ROR2Q01974 943 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 LAMB3Q13751 1172 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 LRRFIP1Q32MZ4 808 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 RRP12Q5JTH9 1297 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 GDF6Q6KF10 455 aaPredicted RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ZSCAN25Q6NSZ9 544 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC73Q6ZRK6 1079 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 MYLK4Q86YV6 388 aaPredicted RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 CCHCR1Q8TD31 782 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 NUP133Q8WUM0 1156 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 RABGGTAQ92696 567 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 UTP4Q969X6 686 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC47Q96A33 483 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 BICD1Q96G01 975 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ALS2CR12Q96Q35 445 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 MOV10L1Q9BXT6 1211 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 TSPAN10Q9H1Z9 355 aaPredicted RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 NRDE2Q9H7Z3 1164 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 IMPACTQ9P2X3 320 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ORC3Q9UBD5 711 aaPredicted RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 ANGEL1Q9UNK9 670 aaKnown RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 WDR37Q9Y2I8 494 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 CTDP1Q9Y5B0 961 aaPredicted RBP6.36□□□□□ -1.39
HMGB4-202ENST00000458277 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 RAPGEF6Q8TEU7 1601 aa6.36□□□□□ -1.39
HMGB4-202ENST00000458277 RBM47A0AV96 593 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ERICH2A1L162 156 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ABLIM1O14639 778 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ZSCAN9O15535 394 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 TPD52L2O43399 206 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ZFXP17010 805 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 EIF2AK2P19525 551 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 TPP2P29144 1249 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 GBP2P32456 591 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 RAB27AP51159 221 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 HIRAP54198 1017 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 SNW1Q13573 536 aaKnown RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 KBTBD12Q3ZCT8 623 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC92Q53HC0 331 aaPredicted RBP6.35□□□□□ -1.39
HMGB4-202ENST00000458277 CCDC93Q567U6 631 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 SH2D4BQ5SQS7 431 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 GORABQ5T7V8 394 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 NUGGCQ68CJ6 796 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 ISM2Q6H9L7 571 aa6.35□□□□□ -1.39
HMGB4-202ENST00000458277 CC2D1AQ6P1N0 951 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms