RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 RIOK1Q9BRS2 568 aaKnown RBP17.4■□□□□ 0.38
UPF3AP2-201ENST00000457924 SPATC1LQ9H0A9 340 aa17.4■□□□□ 0.38
UPF3AP2-201ENST00000457924 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 GABPAQ06546 454 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 TTF1Q15361 905 aaPredicted RBP17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 SHHQ15465 462 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 ANO1Q5XXA6 986 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 MB21D1Q8N884 522 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 CRNKL1Q9BZJ0 848 aaKnown RBP17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 MROH8Q9H579 483 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 MCM9Q9NXL9 1143 aa17.39■□□□□ 0.37
UPF3AP2-201ENST00000457924 A0A0G2JMZ2 1700 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 COBLO75128 1261 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 PLS1Q14651 629 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 TRIM60Q495X7 471 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 MAMSTRQ6ZN01 415 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 AACSQ86V21 672 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 NCAPG2Q86XI2 1143 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 BADQ92934 168 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 CDX2Q99626 313 aaPredicted RBP17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 UNC80Q8N2C7 3258 aa17.38■□□□□ 0.37
UPF3AP2-201ENST00000457924 MYH8P13535 1937 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 SNX17Q15036 470 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 PRAMEF19Q5SWL8 479 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 C9orf50Q5SZB4 431 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 TMEM179Q6ZVK1 233 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 ABRAQ8N0Z2 381 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 SEMA6BQ9H3T3 888 aa17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
UPF3AP2-201ENST00000457924 DNAH12Q6ZR08 3092 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 FLOT1O75955 427 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 ADCYAP1R1P41586 468 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 LRRC41Q15345 812 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 SLC9C2Q5TAH2 1124 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 ARHGEF10LQ9HCE6 1279 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 PDLIM7Q9NR12 457 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 SWAP70Q9UH65 585 aa17.36■□□□□ 0.37
UPF3AP2-201ENST00000457924 FCER1AP12319 257 aa17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 PDE6AP16499 860 aa17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 SMAD3P84022 425 aaKnown RBP17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 C1orf53Q5VUE5 145 aa17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 MAFAQ8NHW3 353 aaPredicted RBP17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 MAML3Q96JK9 1138 aa17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 SH2D4AQ9H788 454 aa17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
UPF3AP2-201ENST00000457924 FAM47AQ5JRC9 791 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 KIAA1755Q5JYT7 1200 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 CEP85Q6P2H3 762 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 SH3RF1Q7Z6J0 888 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 SPICE1Q8N0Z3 855 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 SDR42E1Q8WUS8 393 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 ATG4CQ96DT6 458 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 ZNF532Q9HCE3 1301 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 SCUBE2Q9NQ36 999 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
UPF3AP2-201ENST00000457924 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.37
UPF3AP2-201ENST00000457924 TRIM43BA6NCK2 446 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 SLC25A27O95847 323 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 RARBP10826 455 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 ICA1Q05084 483 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 SLC44A5Q8NCS7 719 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 TRIM43Q96BQ3 446 aaPredicted RBP17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 XPNPEP3Q9NQH7 507 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 NRBP1Q9UHY1 535 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 PHF24Q9UPV7 400 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 TMX2Q9Y320 296 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 TACC3Q9Y6A5 838 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 PARP14Q460N5 1801 aa17.33■□□□□ 0.36
UPF3AP2-201ENST00000457924 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 CYP2D6P10635 497 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 TLE2Q04725 743 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 TMEM92Q6UXU6 159 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 RNF180Q86T96 592 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 LCORLQ8N3X6 602 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 MYLIPQ8WY64 445 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 MMP19Q99542 508 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 TTYH1Q9H313 450 aaPredicted RBP17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 VCPKMTQ9H867 229 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 IL1RAPL2Q9NP60 686 aa17.32■□□□□ 0.36
UPF3AP2-201ENST00000457924 PLXNA1Q9UIW2 1896 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 COL11A1P12107 1806 aaPredicted RBP17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 GOLIM4O00461 696 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 CLTBP09497 229 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 RLBP1P12271 317 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 AKR1B1P15121 316 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 FOSL2P15408 326 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 TMEM132BQ14DG7 1078 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 CLEC10AQ8IUN9 316 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 SIAH1Q8IUQ4 282 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 DYNLL2Q96FJ2 89 aa17.31■□□□□ 0.36
UPF3AP2-201ENST00000457924 DNAJC2Q99543 621 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms