RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
TIMP1-205ENST00000456754 SNAP25P60880 206 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 CAP1Q01518 475 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 USP17L24Q0WX57 530 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 Q6ZUG5 572 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 LPAR1Q92633 364 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 C22orf23Q9BZE7 217 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 ZSWIM6Q9HCJ5 1215 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 TXNRD2Q9NNW7 524 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 GPCPD1Q9NPB8 672 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
TIMP1-205ENST00000456754 SPDYE16A6NNV3 312 aaPredicted RBP16.49■□□□□ 0.23
TIMP1-205ENST00000456754 CA12O43570 354 aa16.49■□□□□ 0.23
TIMP1-205ENST00000456754 FLOT1O75955 427 aa16.49■□□□□ 0.23
TIMP1-205ENST00000456754 TAL1P17542 331 aaPredicted RBP16.49■□□□□ 0.23
TIMP1-205ENST00000456754 SLC16A2P36021 539 aa16.49■□□□□ 0.23
TIMP1-205ENST00000456754 IRX3P78415 501 aaPredicted RBP16.49■□□□□ 0.23
TIMP1-205ENST00000456754 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
TIMP1-205ENST00000456754 REM2Q8IYK8 340 aaPredicted RBP16.49■□□□□ 0.23
TIMP1-205ENST00000456754 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
TIMP1-205ENST00000456754 ATG4CQ96DT6 458 aa16.49■□□□□ 0.23
TIMP1-205ENST00000456754 A0A0G2JMZ2 1700 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 CASP8AP2Q9UKL3 1982 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 ERICH2A1L162 156 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 TMEM232C9JQI7 657 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 CNMDO75829 334 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 BMP3P12645 472 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 SLC1A4P43007 532 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 HERVK_113P62684 666 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 APOBRQ0VD83 1088 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 SLC35G1Q2M3R5 365 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 CCDC178Q5BJE1 867 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 OTUD7BQ6GQQ9 843 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 GMCL1Q96IK5 515 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 TMEM87BQ96K49 555 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 SLC45A1Q9Y2W3 748 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 SMCHD1A6NHR9 2005 aa16.48■□□□□ 0.23
TIMP1-205ENST00000456754 BAZ2BQ9UIF8 2168 aaKnown RBP16.47■□□□□ 0.23
TIMP1-205ENST00000456754 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 HSPA8P11142 646 aaKnown RBP16.47■□□□□ 0.23
TIMP1-205ENST00000456754 OSBPP22059 807 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 PSMA5P28066 241 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 NT5C2P49902 561 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 TOB2Q14106 344 aaPredicted RBP16.47■□□□□ 0.23
TIMP1-205ENST00000456754 PPP4R3BQ5MIZ7 849 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 NFXL1Q6ZNB6 911 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 ZNF654Q8IZM8 581 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 ANKRD13CQ8N6S4 541 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 NUP133Q8WUM0 1156 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 BRF1Q92994 677 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 IL17RAQ96F46 866 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 PARK7Q99497 189 aaKnown RBP16.47■□□□□ 0.23
TIMP1-205ENST00000456754 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 BTBD7Q9P203 1132 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 RBPJLQ9UBG7 517 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 SYNPO2Q9UMS6 1093 aa16.47■□□□□ 0.23
TIMP1-205ENST00000456754 WDR19Q8NEZ3 1342 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 TLR2O60603 784 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 CTGFP29279 349 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 DSG3P32926 999 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 RBM25P49756 843 aaKnown RBP16.46■□□□□ 0.23
TIMP1-205ENST00000456754 ANAPC15P60006 121 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 TROAPQ12815 778 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
TIMP1-205ENST00000456754 Q3C1V9 767 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 C17orf99Q6UX52 265 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 SMCR8Q8TEV9 937 aaPredicted RBP16.46■□□□□ 0.23
TIMP1-205ENST00000456754 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 BEGAINQ9BUH8 593 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 TM6SF1Q9BZW5 370 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 UBA5Q9GZZ9 404 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 ZCCHC17Q9NP64 241 aaKnown RBP16.46■□□□□ 0.23
TIMP1-205ENST00000456754 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 CYP46A1Q9Y6A2 500 aa16.46■□□□□ 0.23
TIMP1-205ENST00000456754 HMGB1P09429 215 aaKnown RBP16.45■□□□□ 0.22
TIMP1-205ENST00000456754 BCRP11274 1271 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 LIFRP42702 1097 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 PABPC4Q13310 644 aaKnown RBP eCLIP16.45■□□□□ 0.22
TIMP1-205ENST00000456754 COG2Q14746 738 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 NOL8Q76FK4 1167 aaKnown RBP16.45■□□□□ 0.22
TIMP1-205ENST00000456754 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 CMTR1Q8N1G2 835 aaKnown RBP16.45■□□□□ 0.22
TIMP1-205ENST00000456754 TBC1D32Q96NH3 1257 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 SLF1Q9BQI6 1058 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 ARHGAP39Q9C0H5 1083 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 MAD2L2Q9UI95 211 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 PPP1R9AQ9ULJ8 1098 aa16.45■□□□□ 0.22
TIMP1-205ENST00000456754 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
TIMP1-205ENST00000456754 CCDC69A6NI79 296 aa16.44■□□□□ 0.22
TIMP1-205ENST00000456754 GPR25O00155 361 aa16.44■□□□□ 0.22
TIMP1-205ENST00000456754 DTNBO60941 627 aa16.44■□□□□ 0.22
TIMP1-205ENST00000456754 LBX1P52954 281 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms