RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 PNMA3Q9UL41 463 aa20.92■□□□□ 0.94
FAM239A-203ENST00000456563 CCDC69A6NI79 296 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 BMP3P12645 472 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 FGD1P98174 961 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 NFXL1Q6ZNB6 911 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 NUP88Q99567 741 aaPredicted RBP20.91■□□□□ 0.94
FAM239A-203ENST00000456563 ASCC2Q9H1I8 757 aaPredicted RBP20.91■□□□□ 0.94
FAM239A-203ENST00000456563 ALDH8A1Q9H2A2 487 aaPredicted RBP20.91■□□□□ 0.94
FAM239A-203ENST00000456563 PDRG1Q9NUG6 133 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 RNF186Q9NXI6 227 aa20.91■□□□□ 0.94
FAM239A-203ENST00000456563 CA12O43570 354 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 IRX3P78415 501 aaPredicted RBP20.9■□□□□ 0.94
FAM239A-203ENST00000456563 TROAPQ12815 778 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 TAF1CQ15572 869 aaPredicted RBP20.9■□□□□ 0.94
FAM239A-203ENST00000456563 ZNF654Q8IZM8 581 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 PARK7Q99497 189 aaKnown RBP20.9■□□□□ 0.94
FAM239A-203ENST00000456563 MAP3K14Q99558 947 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 CFHR5Q9BXR6 569 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 TANGO6Q9C0B7 1094 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 WBP1LQ9NX94 342 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 SAGE1Q9NXZ1 904 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 MTMR7Q9Y216 660 aa20.9■□□□□ 0.94
FAM239A-203ENST00000456563 PLA2G6O60733 806 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 DDAH1O94760 285 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 ZNF543Q08ER8 600 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 COG2Q14746 738 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
FAM239A-203ENST00000456563 RASGRP2Q7LDG7 609 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 BRF1Q92994 677 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 ZFYVE28Q9HCC9 887 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 FEM1BQ9UK73 627 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
FAM239A-203ENST00000456563 MYPNQ86TC9 1320 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 FLOT1O75955 427 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 CYP2C8P10632 490 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 TOB2Q14106 344 aaPredicted RBP20.88■□□□□ 0.93
FAM239A-203ENST00000456563 CCDC96Q2M329 555 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 ASPRV1Q53RT3 343 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 KCTD1Q719H9 257 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 P2RX7Q99572 595 aaKnown RBP20.88■□□□□ 0.93
FAM239A-203ENST00000456563 HOXC10Q9NYD6 342 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 BRPF3Q9ULD4 1205 aa20.88■□□□□ 0.93
FAM239A-203ENST00000456563 TMEM232C9JQI7 657 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 TRPA1O75762 1119 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 PARP1P09874 1014 aaKnown RBP20.87■□□□□ 0.93
FAM239A-203ENST00000456563 CALM1P0DP23 149 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 CALM2P0DP24 149 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 CALM3P0DP25 149 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 DSG3P32926 999 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 NEK4P51957 841 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 EVCP57679 992 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 CRHR2Q13324 411 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 GRM4Q14833 912 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 BTNL9Q6UXG8 535 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 LBX2Q6XYB7 198 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 SYNE3Q6ZMZ3 975 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 FAM160B2Q86V87 743 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 IL27Q8NEV9 243 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 CHURC1Q8WUH1 139 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 CHMP4CQ96CF2 233 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 BEGAINQ9BUH8 593 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 FBXO28Q9NVF7 368 aa20.87■□□□□ 0.93
FAM239A-203ENST00000456563 FRMPD2Q68DX3 1309 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-203ENST00000456563 ADGRA2Q96PE1 1338 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 KLF18A0A0U1RQI7 1052 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 PALM3A6NDB9 673 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-203ENST00000456563 TLR2O60603 784 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 STAT2P52630 851 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 RCAN1P53805 252 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 HERVK_113P62684 666 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 APOBRQ0VD83 1088 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 RABEP1Q15276 862 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 PRPF38AQ8NAV1 312 aaKnown RBP20.86■□□□□ 0.93
FAM239A-203ENST00000456563 GTF3C2Q8WUA4 911 aaPredicted RBP20.86■□□□□ 0.93
FAM239A-203ENST00000456563 SLF1Q9BQI6 1058 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 MYL10Q9BUA6 226 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 GPCPD1Q9NPB8 672 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 PPP1R9AQ9ULJ8 1098 aa20.86■□□□□ 0.93
FAM239A-203ENST00000456563 ISY1Q9ULR0 285 aaKnown RBP20.86■□□□□ 0.93
FAM239A-203ENST00000456563 SPDYE16A6NNV3 312 aaPredicted RBP20.85■□□□□ 0.93
FAM239A-203ENST00000456563 GCLCP48506 637 aaPredicted RBP20.85■□□□□ 0.93
FAM239A-203ENST00000456563 ANKRD1Q15327 319 aa20.85■□□□□ 0.93
FAM239A-203ENST00000456563 TTBK2Q6IQ55 1244 aa20.85■□□□□ 0.93
FAM239A-203ENST00000456563 SMCR8Q8TEV9 937 aaPredicted RBP20.85■□□□□ 0.93
FAM239A-203ENST00000456563 NUP133Q8WUM0 1156 aa20.85■□□□□ 0.93
FAM239A-203ENST00000456563 MAD2L2Q9UI95 211 aa20.85■□□□□ 0.93
FAM239A-203ENST00000456563 ADAMTS5Q9UNA0 930 aa20.85■□□□□ 0.93
FAM239A-203ENST00000456563 ZBTB43O43298 467 aa20.84■□□□□ 0.93
FAM239A-203ENST00000456563 TBC1D8O95759 1140 aa20.84■□□□□ 0.93
FAM239A-203ENST00000456563 GOLGA8HP0CJ92 632 aa20.84■□□□□ 0.93
FAM239A-203ENST00000456563 AK2P54819 239 aa20.84■□□□□ 0.93
FAM239A-203ENST00000456563 CTCFLQ8NI51 663 aaPredicted RBP20.84■□□□□ 0.93
FAM239A-203ENST00000456563 ATG4CQ96DT6 458 aa20.84■□□□□ 0.93
FAM239A-203ENST00000456563 R3HDMLQ9H3Y0 253 aa20.84■□□□□ 0.93
FAM239A-203ENST00000456563 FDX1P10109 184 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 KIF5BP33176 963 aa20.83■□□□□ 0.93
FAM239A-203ENST00000456563 IKQ13123 557 aaPredicted RBP20.83■□□□□ 0.93
FAM239A-203ENST00000456563 POTEEQ6S8J3 1075 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms