RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PXYLP1Q8TE99 480 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 SOCS4Q8WXH5 440 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 NUP88Q99567 741 aaPredicted RBP21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 SYNPO2Q9UMS6 1093 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 PLIN4Q96Q06 1357 aa21.36■■□□□ 1.01
PDLIM2-215ENST00000456545 GREB1LQ9C091 1923 aaPredicted RBP21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 DOCK3Q8IZD9 2030 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 FGRP09769 529 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 ELNP15502 786 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 RGS19P49795 217 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 STAG1Q8WVM7 1258 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 FBXO28Q9NVF7 368 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 GJD2Q9UKL4 321 aa21.35■■□□□ 1.01
PDLIM2-215ENST00000456545 NMT2O60551 498 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 IKQ13123 557 aaPredicted RBP21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 NCAPG2Q86XI2 1143 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 GMCL1P1Q8NEA9 526 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 ESR2Q92731 530 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 CHMP4CQ96CF2 233 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 SLF1Q9BQI6 1058 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 SPATC1LQ9H0A9 340 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 IL17RBQ9NRM6 502 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 PPP1R9AQ9ULJ8 1098 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 MTMR7Q9Y216 660 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 TACC3Q9Y6A5 838 aa21.34■■□□□ 1.01
PDLIM2-215ENST00000456545 BMP3P12645 472 aa21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 RGS2P41220 211 aa21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 KIAA1211Q6ZU35 1233 aa21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 TBC1D10CQ8IV04 446 aa21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 PRPF38AQ8NAV1 312 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 MOV10L1Q9BXT6 1211 aaKnown RBP21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 RNF208Q9H0X6 261 aa21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 FEM1BQ9UK73 627 aa21.33■■□□□ 1.01
PDLIM2-215ENST00000456545 POTEFA5A3E0 1075 aa21.32■■□□□ 1
PDLIM2-215ENST00000456545 ZBED4O75132 1171 aa21.32■■□□□ 1
PDLIM2-215ENST00000456545 SLC1A4P43007 532 aa21.32■■□□□ 1
PDLIM2-215ENST00000456545 MTFR1Q15390 333 aa21.32■■□□□ 1
PDLIM2-215ENST00000456545 KIFC2Q96AC6 838 aa21.32■■□□□ 1
PDLIM2-215ENST00000456545 SLC15A5A6NIM6 579 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 VWA5AO00534 786 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 INHAP05111 366 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 CCL5P13501 91 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 ERCC3P19447 782 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 PTPREP23469 700 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 MCCP23508 829 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 SLC4A3P48751 1232 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 TRMT44Q8IYL2 757 aaKnown RBP21.31■■□□□ 1
PDLIM2-215ENST00000456545 SHCBP1Q8NEM2 672 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 CHURC1Q8WUH1 139 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 MROH8Q9H579 483 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 TCP11L1Q9NUJ3 509 aa21.31■■□□□ 1
PDLIM2-215ENST00000456545 TMEM232C9JQI7 657 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 STRNO43815 780 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 SLC25A27O95847 323 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
PDLIM2-215ENST00000456545 STAT3P40763 770 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 NT5C2P49902 561 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 MAP2K5Q13163 448 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 TMEM132BQ14DG7 1078 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 CCDC178Q5BJE1 867 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 MORN1Q5T089 497 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 DPP9Q86TI2 863 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 SKAP1Q86WV1 359 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 IQCA1Q86XH1 822 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 TTC14Q96N46 770 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 KRT23Q9C075 422 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 NBPF3Q9H094 633 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 IL25Q9H293 177 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 CNNM2Q9H8M5 875 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 ADAMTS5Q9UNA0 930 aa21.3■■□□□ 1
PDLIM2-215ENST00000456545 U3KPZ7 1027 aaPredicted RBP21.3■■□□□ 1
PDLIM2-215ENST00000456545 SGSM2O43147 1006 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 HMGCRP04035 888 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 XRCC5P13010 732 aaKnown RBP21.29■■□□□ 1
PDLIM2-215ENST00000456545 ZKSCAN1P17029 563 aaPredicted RBP21.29■■□□□ 1
PDLIM2-215ENST00000456545 EN2P19622 333 aaPredicted RBP21.29■■□□□ 1
PDLIM2-215ENST00000456545 TRDNQ13061 729 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 RCSD1Q6JBY9 416 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 CPXCR1Q8N123 301 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 NKX2-3Q8TAU0 364 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 GMCL1Q96IK5 515 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 ZKSCAN3Q9BRR0 538 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 NEDD4P46934 1319 aa21.29■■□□□ 1
PDLIM2-215ENST00000456545 RLFQ13129 1914 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 B4E1Z4 1266 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 KDM4AO75164 1064 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 STAT2P52630 851 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 PTH1RQ03431 593 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 CCDC96Q2M329 555 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 BMP2KLQ5H9B9 411 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 CASC1Q6TDU7 716 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 FAM160B2Q86V87 743 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 APBA2Q99767 749 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 TMEM47Q9BQJ4 181 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 UNC93B1Q9H1C4 597 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 SLC5A4Q9NY91 659 aa21.28■■□□□ 1
PDLIM2-215ENST00000456545 FCER1AP12319 257 aa21.27■■□□□ 1
PDLIM2-215ENST00000456545 COPB2P35606 906 aa21.27■■□□□ 1
PDLIM2-215ENST00000456545 KCTD1Q719H9 257 aa21.27■■□□□ 1
PDLIM2-215ENST00000456545 RIOX2Q8IUF8 465 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms