RNA–Protein interactions for RNA: ENST00000456378.1

UBP1-205, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-205ENST00000456378 IL17RBQ9NRM6 502 aa28.17■■■□□ 2.1
UBP1-205ENST00000456378 ORC4O43929 436 aa28.16■■■□□ 2.1
UBP1-205ENST00000456378 LRRC47Q8N1G4 583 aaKnown RBP28.16■■■□□ 2.1
UBP1-205ENST00000456378 MB21D1Q8N884 522 aa28.16■■■□□ 2.1
UBP1-205ENST00000456378 TRIB2Q92519 343 aa28.16■■■□□ 2.1
UBP1-205ENST00000456378 SHISA4Q96DD7 197 aa28.16■■■□□ 2.1
UBP1-205ENST00000456378 SPATC1LQ9H0A9 340 aa28.16■■■□□ 2.1
UBP1-205ENST00000456378 MYH4Q9Y623 1939 aa28.16■■■□□ 2.1
UBP1-205ENST00000456378 HIP1O00291 1037 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 NMT2O60551 498 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 GJB1P08034 283 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 XRCC5P13010 732 aaKnown RBP28.15■■■□□ 2.1
UBP1-205ENST00000456378 PTPREP23469 700 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 MFAP1P55081 439 aaKnown RBP28.15■■■□□ 2.1
UBP1-205ENST00000456378 HAND2P61296 217 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 WDR78Q5VTH9 848 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 IL25Q9H293 177 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 PPP1R9AQ9ULJ8 1098 aa28.15■■■□□ 2.1
UBP1-205ENST00000456378 HMGCRP04035 888 aa28.14■■■□□ 2.1
UBP1-205ENST00000456378 TMEM132BQ14DG7 1078 aa28.14■■■□□ 2.1
UBP1-205ENST00000456378 CWC22Q9HCG8 908 aaKnown RBP28.14■■■□□ 2.1
UBP1-205ENST00000456378 SYNPO2Q9UMS6 1093 aa28.14■■■□□ 2.1
UBP1-205ENST00000456378 SLC15A5A6NIM6 579 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 TSPY2A6NKD2 308 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 RANBP6O60518 1105 aaKnown RBP28.13■■■□□ 2.09
UBP1-205ENST00000456378 RGS2P41220 211 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 GJA8P48165 433 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 MAP2K5Q13163 448 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 CCL14Q16627 93 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 GMCL1P1Q8NEA9 526 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 NKX2-3Q8TAU0 364 aa28.13■■■□□ 2.09
UBP1-205ENST00000456378 VWA5AO00534 786 aa28.12■■■□□ 2.09
UBP1-205ENST00000456378 ERCC3P19447 782 aa28.12■■■□□ 2.09
UBP1-205ENST00000456378 PLS1Q14651 629 aa28.12■■■□□ 2.09
UBP1-205ENST00000456378 SHCBP1Q8NEM2 672 aa28.12■■■□□ 2.09
UBP1-205ENST00000456378 REPS2Q8NFH8 660 aa28.12■■■□□ 2.09
UBP1-205ENST00000456378 GRB14Q14449 540 aa28.11■■■□□ 2.09
UBP1-205ENST00000456378 TBC1D10CQ8IV04 446 aa28.11■■■□□ 2.09
UBP1-205ENST00000456378 U2AF1L4Q8WU68 220 aaKnown RBP28.11■■■□□ 2.09
UBP1-205ENST00000456378 SLF1Q9BQI6 1058 aa28.11■■■□□ 2.09
UBP1-205ENST00000456378 PAK6Q9NQU5 681 aaPredicted RBP28.11■■■□□ 2.09
UBP1-205ENST00000456378 PDE4DIPQ5VU43 2346 aa28.1■■■□□ 2.09
UBP1-205ENST00000456378 MKI67P46013 3256 aaKnown RBP28.1■■■□□ 2.09
UBP1-205ENST00000456378 NOVP48745 357 aa28.1■■■□□ 2.09
UBP1-205ENST00000456378 RRP12Q5JTH9 1297 aaKnown RBP28.1■■■□□ 2.09
UBP1-205ENST00000456378 SLFN13Q68D06 897 aa28.1■■■□□ 2.09
UBP1-205ENST00000456378 APBA2Q99767 749 aa28.1■■■□□ 2.09
UBP1-205ENST00000456378 COL11A1P12107 1806 aaPredicted RBP28.09■■■□□ 2.09
UBP1-205ENST00000456378 SGPL1O95470 568 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 AKNAD1Q5T1N1 836 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 MAP3K21Q5TCX8 1036 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 DEFB118Q96PH6 123 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 TOMM22Q9NS69 142 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 FLRT1Q9NZU1 646 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 ZNF214Q9UL59 606 aaPredicted RBP28.09■■■□□ 2.09
UBP1-205ENST00000456378 STX8Q9UNK0 236 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 IVNS1ABPQ9Y6Y0 642 aa28.09■■■□□ 2.09
UBP1-205ENST00000456378 NCAPG2Q86XI2 1143 aa28.08■■■□□ 2.09
UBP1-205ENST00000456378 TRMT44Q8IYL2 757 aaKnown RBP28.08■■■□□ 2.09
UBP1-205ENST00000456378 NPLOC4Q8TAT6 608 aa28.08■■■□□ 2.09
UBP1-205ENST00000456378 STAG1Q8WVM7 1258 aa28.08■■■□□ 2.09
UBP1-205ENST00000456378 DSCC1Q9BVC3 393 aa28.08■■■□□ 2.09
UBP1-205ENST00000456378 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.08■■■□□ 2.096e-13■■□□□ 14.2
UBP1-205ENST00000456378 HOXC6P09630 235 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 ZKSCAN1P17029 563 aaPredicted RBP28.07■■■□□ 2.08
UBP1-205ENST00000456378 CHMLP26374 656 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 MFSD6Q6ZSS7 791 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 RIOX2Q8IUF8 465 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 PRPF38AQ8NAV1 312 aaKnown RBP28.07■■■□□ 2.08
UBP1-205ENST00000456378 CHMP4CQ96CF2 233 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 MROH8Q9H579 483 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 RPTORQ8N122 1335 aa28.07■■■□□ 2.08
UBP1-205ENST00000456378 ZNF213O14771 459 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 STRNO43815 780 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 BMP3P12645 472 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 PRKAR2AP13861 404 aaKnown RBP28.06■■■□□ 2.08
UBP1-205ENST00000456378 ADORA2AP29274 412 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 STAT3P40763 770 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 CACNB2Q08289 660 aaPredicted RBP28.06■■■□□ 2.08
UBP1-205ENST00000456378 PPP4R3BQ5MIZ7 849 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 TCP11L1Q9NUJ3 509 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 FEM1BQ9UK73 627 aa28.06■■■□□ 2.08
UBP1-205ENST00000456378 COBLO75128 1261 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 SLC25A27O95847 323 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 MCCP23508 829 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 NEDD4P46934 1319 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 RASGRP2Q7LDG7 609 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 UBE2Q1Q7Z7E8 422 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 SKAP1Q86WV1 359 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 KIFC2Q96AC6 838 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 GMCL1Q96IK5 515 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 CRISPLD2Q9H0B8 497 aa28.05■■■□□ 2.08
UBP1-205ENST00000456378 HMX1Q9NP08 348 aaPredicted RBP28.05■■■□□ 2.08
UBP1-205ENST00000456378 IGHA2P01877 340 aa28.04■■■□□ 2.08
UBP1-205ENST00000456378 PCP11498 1178 aaKnown RBP28.04■■■□□ 2.08
UBP1-205ENST00000456378 TMEM232C9JQI7 657 aa28.03■■■□□ 2.08
UBP1-205ENST00000456378 RNF41Q9H4P4 317 aaPredicted RBP28.03■■■□□ 2.08
UBP1-205ENST00000456378 ZNF236Q9UL36 1845 aa28.02■■■□□ 2.08
UBP1-205ENST00000456378 TFRCP02786 760 aaKnown RBP28.02■■■□□ 2.08
UBP1-205ENST00000456378 SLC1A4P43007 532 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms