RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 STXBP3O00186 592 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 SPTLC2O15270 562 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 MYO1BO43795 1136 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 PPFIA3O75145 1194 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 BMP15O95972 392 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 EEF2P13639 858 aaKnown RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 CAP2P40123 477 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 GMPSP49915 693 aaPredicted RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 SNW1Q13573 536 aaKnown RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 TNFAIP1Q13829 316 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 ABCB5Q2M3G0 1257 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 SLC4A8Q2Y0W8 1093 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 FOXD4L6Q3SYB3 417 aaPredicted RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 CCDC183Q5T5S1 534 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 CAVIN1Q6NZI2 390 aaKnown RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 USP17L2Q6R6M4 530 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 FOXD4L3Q6VB84 417 aaPredicted RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 GPC2Q8N158 579 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 DCAF4Q8WV16 495 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 CSRNP1Q96S65 589 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 FUCA2Q9BTY2 467 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 FHDC1Q9C0D6 1143 aaPredicted RBP8.63□□□□□ -1.03
ERCC3-204ENST00000456257 PCDHA7Q9UN72 937 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 KCNJ14Q9UNX9 436 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 TMX2Q9Y320 296 aa8.63□□□□□ -1.03
ERCC3-204ENST00000456257 PNMA6FA0A0J9YX94 578 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 TCP10L2B9ZVM9 353 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 SLURP2P0DP57 97 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 LIG1P18858 919 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 PTPREP23469 700 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 KRT2P35908 639 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 RASSF7Q02833 373 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 NR5A1Q13285 461 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 RASA3Q14644 834 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 SEPT2Q15019 361 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 RBM26Q5T8P6 1007 aaKnown RBP8.62□□□□□ -1.03
ERCC3-204ENST00000456257 TYW1BQ6NUM6 668 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 LRSAM1Q6UWE0 723 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
ERCC3-204ENST00000456257 BLIDQ8IZY5 108 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 FMR1NBQ8N0W7 255 aaPredicted RBP8.62□□□□□ -1.03
ERCC3-204ENST00000456257 CCDC82Q8N4S0 544 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 C4orf32Q8N8J7 132 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 JMJD4Q9H9V9 463 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.62□□□□□ -1.03
ERCC3-204ENST00000456257 DDX19AQ9NUU7 478 aaKnown RBP8.62□□□□□ -1.03
ERCC3-204ENST00000456257 GPRC5DQ9NZD1 345 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 VPS54Q9P1Q0 977 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 PCDHA4Q9UN74 947 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 HPSEQ9Y251 543 aa8.62□□□□□ -1.03
ERCC3-204ENST00000456257 ADAMTSL1Q8N6G6 1762 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 A0A1W2PRG0 241 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 SHTN1A0MZ66 631 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 CLRN2A0PK11 232 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 F5H6K3 240 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 H7C1D1 291 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 CUTAO60888 179 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 EGFRP00533 1210 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 TNNI2P48788 182 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 KLRC3Q07444 240 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 EARS2Q5JPH6 523 aaKnown RBP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 WWC2Q6AWC2 1192 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 ARHGAP27Q6ZUM4 889 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 MICALL2Q8IY33 904 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 JMYQ8N9B5 988 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 RRP36Q96EU6 259 aaKnown RBP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 TIGD1Q96MW7 591 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 FTOQ9C0B1 505 aaKnown RBP eCLIP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 GZF1Q9H116 711 aaPredicted RBP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 DEFB129Q9H1M3 183 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 CABP5Q9NP86 173 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 PPP1R1BQ9UD71 204 aaPredicted RBP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 SRPRBQ9Y5M8 271 aaKnown RBP8.61□□□□□ -1.03
ERCC3-204ENST00000456257 PPP2R3BQ9Y5P8 575 aa8.61□□□□□ -1.03
ERCC3-204ENST00000456257 PITPNM2Q9BZ72 1349 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 ZNF541Q9H0D2 1346 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 TRIM75PA6NK02 468 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 ADAMTS3O15072 1205 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CTAGE5O15320 804 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 EDIL3O43854 480 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CTNND1O60716 968 aaKnown RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 NR1I2O75469 434 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 GH2P01242 217 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 ASNSP08243 561 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 DEKP35659 375 aaKnown RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 MRE11P49959 708 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 NLRP5P59047 1200 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 FAM160A1Q05DH4 1040 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 ORC2Q13416 577 aaPredicted RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 RESP18Q5W5W9 173 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 ARL6IP4Q66PJ3 421 aaKnown RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 SLFN13Q68D06 897 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CCAR1Q8IX12 1150 aaKnown RBP8.6□□□□□ -1.03
ERCC3-204ENST00000456257 ADGRF4Q8IZF3 695 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CCDC148Q8NFR7 591 aa8.6□□□□□ -1.03
ERCC3-204ENST00000456257 CCDC12Q8WUD4 166 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms