RNA–Protein interactions for RNA: ENST00000455656.1

TMEM56-202, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-202ENST00000455656 HOXC10Q9NYD6 342 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 SYNPO2Q9UMS6 1093 aa14.08□□□□□ -0.16
TMEM56-202ENST00000455656 NMT2O60551 498 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 TTLL1O95922 423 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 IGHA2P01877 340 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
TMEM56-202ENST00000455656 TSPY3P0CV98 308 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 TSPY8P0CW00 308 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 XRCC5P13010 732 aaKnown RBP14.07□□□□□ -0.16
TMEM56-202ENST00000455656 CYP2B6P20813 491 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 PTPREP23469 700 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 UBXN2AP68543 259 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 GRB14Q14449 540 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 TMEM132BQ14DG7 1078 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 MAP3K21Q5TCX8 1036 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 TBC1D10CQ8IV04 446 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 LRRC47Q8N1G4 583 aaKnown RBP14.07□□□□□ -0.16
TMEM56-202ENST00000455656 GMCL1P1Q8NEA9 526 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 NUDT12Q9BQG2 462 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 TMEM106CQ9BVX2 250 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 PAK6Q9NQU5 681 aaPredicted RBP14.07□□□□□ -0.16
TMEM56-202ENST00000455656 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
TMEM56-202ENST00000455656 ALPK3Q96L96 1907 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 HIP1O00291 1037 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 HMGCRP04035 888 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 GJB1P08034 283 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 GJA8P48165 433 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 HAND2P61296 217 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 CCNA1P78396 465 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 MAP2K5Q13163 448 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 CCL14Q16627 93 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 MB21D1Q8N884 522 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 SHCBP1Q8NEM2 672 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 RNF208Q9H0X6 261 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 DIAPH3Q9NSV4 1193 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 FLRT1Q9NZU1 646 aa14.06□□□□□ -0.16
TMEM56-202ENST00000455656 ZNF214Q9UL59 606 aaPredicted RBP14.06□□□□□ -0.16
TMEM56-202ENST00000455656 SLC15A5A6NIM6 579 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 VWA5AO00534 786 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 HOXC6P09630 235 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 ERCC3P19447 782 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 RGS2P41220 211 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 RASGRP2Q7LDG7 609 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 UBE2Q1Q7Z7E8 422 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 NPLOC4Q8TAT6 608 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 APBA2Q99767 749 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 DSCC1Q9BVC3 393 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 PDE4DIPQ5VU43 2346 aa14.05□□□□□ -0.16
TMEM56-202ENST00000455656 SMCHD1A6NHR9 2005 aa14.04□□□□□ -0.16
TMEM56-202ENST00000455656 TSPY2A6NKD2 308 aa14.04□□□□□ -0.16
TMEM56-202ENST00000455656 CHMLP26374 656 aa14.04□□□□□ -0.16
TMEM56-202ENST00000455656 MFAP1P55081 439 aaKnown RBP14.04□□□□□ -0.16
TMEM56-202ENST00000455656 AKNAD1Q5T1N1 836 aa14.04□□□□□ -0.16
TMEM56-202ENST00000455656 SKAP1Q86WV1 359 aa14.04□□□□□ -0.16
TMEM56-202ENST00000455656 U2AF1L4Q8WU68 220 aaKnown RBP14.04□□□□□ -0.16
TMEM56-202ENST00000455656 BIN2Q9UBW5 565 aaPredicted RBP14.04□□□□□ -0.16
TMEM56-202ENST00000455656 NEDD4P46934 1319 aa14.04□□□□□ -0.16
TMEM56-202ENST00000455656 RAD21O60216 631 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 RANBP6O60518 1105 aaKnown RBP14.03□□□□□ -0.16
TMEM56-202ENST00000455656 SGPL1O95470 568 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 CACNB2Q08289 660 aaPredicted RBP14.03□□□□□ -0.16
TMEM56-202ENST00000455656 SLFN13Q68D06 897 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 RCSD1Q6JBY9 416 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 GMCL1Q96IK5 515 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 SLF1Q9BQI6 1058 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 CRISPLD2Q9H0B8 497 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.16
TMEM56-202ENST00000455656 TCP11L1Q9NUJ3 509 aa14.03□□□□□ -0.16
TMEM56-202ENST00000455656 LCTP09848 1927 aa14.02□□□□□ -0.16
TMEM56-202ENST00000455656 RPTORQ8N122 1335 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 RAD50Q92878 1312 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 COBLO75128 1261 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 PCP11498 1178 aaKnown RBP14.02□□□□□ -0.17
TMEM56-202ENST00000455656 BMP3P12645 472 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 ZKSCAN1P17029 563 aaPredicted RBP14.02□□□□□ -0.17
TMEM56-202ENST00000455656 ADORA2AP29274 412 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 PLS1Q14651 629 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 WDR78Q5VTH9 848 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
TMEM56-202ENST00000455656 PRPF38AQ8NAV1 312 aaKnown RBP14.02□□□□□ -0.17
TMEM56-202ENST00000455656 MROH8Q9H579 483 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 RIPK3Q9Y572 518 aa14.02□□□□□ -0.17
TMEM56-202ENST00000455656 ZNF213O14771 459 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 STRNO43815 780 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 SLC25A27O95847 323 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
TMEM56-202ENST00000455656 STAT3P40763 770 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 MNX1P50219 401 aaPredicted RBP14.01□□□□□ -0.17
TMEM56-202ENST00000455656 PTH1RQ03431 593 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 RRP12Q5JTH9 1297 aaKnown RBP14.01□□□□□ -0.17
TMEM56-202ENST00000455656 CENPQQ7L2Z9 268 aaPredicted RBP14.01□□□□□ -0.17
TMEM56-202ENST00000455656 CCAR1Q8IX12 1150 aaKnown RBP14.01□□□□□ -0.17
TMEM56-202ENST00000455656 TRMT44Q8IYL2 757 aaKnown RBP14.01□□□□□ -0.17
TMEM56-202ENST00000455656 ABRAQ8N0Z2 381 aa14.01□□□□□ -0.17
TMEM56-202ENST00000455656 DEFB118Q96PH6 123 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms