RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 FAM110CQ1W6H9 321 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 Q3C1V9 767 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 RNF20Q5VTR2 975 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 RALYLQ86SE5 291 aaKnown RBP17.29■□□□□ 0.36
CLCN1-203ENST00000455478 GTF3C2Q8WUA4 911 aaPredicted RBP17.29■□□□□ 0.36
CLCN1-203ENST00000455478 CHMP4CQ96CF2 233 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 ADAMTS5Q9UNA0 930 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 RABGAP1Q9Y3P9 1069 aa17.29■□□□□ 0.36
CLCN1-203ENST00000455478 MYPNQ86TC9 1320 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 BMP3P12645 472 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 HSPA4P34932 840 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 ANTXR2P58335 489 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 CHST3Q7LGC8 479 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 CTU1Q7Z7A3 348 aaKnown RBP17.28■□□□□ 0.36
CLCN1-203ENST00000455478 GPRC5AQ8NFJ5 357 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 ATG4CQ96DT6 458 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 UBAC1Q9BSL1 405 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 USP26Q9BXU7 913 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 BTBD7Q9P203 1132 aa17.28■□□□□ 0.36
CLCN1-203ENST00000455478 DOCK3Q8IZD9 2030 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 EPB41L2O43491 1005 aaKnown RBP17.27■□□□□ 0.36
CLCN1-203ENST00000455478 ECM2O94769 699 aaPredicted RBP17.27■□□□□ 0.36
CLCN1-203ENST00000455478 SLC1A4P43007 532 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 PSMC4P43686 418 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 KIF22Q14807 665 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 OTOP1Q7RTM1 612 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 TRIM47Q96LD4 638 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 PPP1R9AQ9ULJ8 1098 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 MTMR7Q9Y216 660 aa17.27■□□□□ 0.36
CLCN1-203ENST00000455478 MGAMO43451 1857 aa17.27■□□□□ 0.35
CLCN1-203ENST00000455478 IFIT3O14879 490 aaKnown RBP17.26■□□□□ 0.35
CLCN1-203ENST00000455478 ERVK-9P63128 1117 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 ERVK-24P63145 666 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 ADCK5Q3MIX3 580 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 SAMD1Q6SPF0 538 aaPredicted RBP17.26■□□□□ 0.35
CLCN1-203ENST00000455478 PRPF38AQ8NAV1 312 aaKnown RBP17.26■□□□□ 0.35
CLCN1-203ENST00000455478 PNMA1Q8ND90 353 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 IGDCC4Q8TDY8 1250 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 SLF1Q9BQI6 1058 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 EFCC1Q9HA90 598 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 SENP2Q9HC62 589 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 FEM1BQ9UK73 627 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 TRIM17Q9Y577 477 aa17.26■□□□□ 0.35
CLCN1-203ENST00000455478 A0A0G2JMZ2 1700 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 TMEM232C9JQI7 657 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 VWA5AO00534 786 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 PLA2G6O60733 806 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 CAPN15O75808 1086 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 SNHG28P0DPA3 235 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 PDHBP11177 359 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 ZKSCAN1P17029 563 aaPredicted RBP17.25■□□□□ 0.35
CLCN1-203ENST00000455478 MCM5P33992 734 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 ARHGEF6Q15052 776 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
CLCN1-203ENST00000455478 KCTD1Q719H9 257 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 MB21D1Q8N884 522 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 KAT14Q9H8E8 782 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 SNX14Q9Y5W7 946 aa17.25■□□□□ 0.35
CLCN1-203ENST00000455478 COL11A1P12107 1806 aaPredicted RBP17.24■□□□□ 0.35
CLCN1-203ENST00000455478 PRC1O43663 620 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
CLCN1-203ENST00000455478 FCGRTP55899 365 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 KRT32Q14532 448 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 REPS2Q8NFH8 660 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 CHURC1Q8WUH1 139 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 NEK1Q96PY6 1258 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 MTA3Q9BTC8 594 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 PORCNQ9H237 461 aa17.24■□□□□ 0.35
CLCN1-203ENST00000455478 GPHNQ9NQX3 736 aaPredicted RBP17.24■□□□□ 0.35
CLCN1-203ENST00000455478 SEC24BO95487 1268 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 GNRH1P01148 92 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 STAT2P52630 851 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 EXOSC10Q01780 885 aaKnown RBP17.23■□□□□ 0.35
CLCN1-203ENST00000455478 ZNF543Q08ER8 600 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 WTAPQ15007 396 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 SART3Q15020 963 aaKnown RBP17.23■□□□□ 0.35
CLCN1-203ENST00000455478 PKN2Q16513 984 aaKnown RBP17.23■□□□□ 0.35
CLCN1-203ENST00000455478 CCDC96Q2M329 555 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 BTNL9Q6UXG8 535 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 FAM160B2Q86V87 743 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 KIFC2Q96AC6 838 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 MCOLN1Q9GZU1 580 aa17.23■□□□□ 0.35
CLCN1-203ENST00000455478 ISY1Q9ULR0 285 aaKnown RBP17.23■□□□□ 0.35
CLCN1-203ENST00000455478 FRMPD2Q68DX3 1309 aaPredicted RBP17.22■□□□□ 0.35
CLCN1-203ENST00000455478 ERICH2A1L162 156 aa17.22■□□□□ 0.35
CLCN1-203ENST00000455478 TNPO2O14787 897 aaKnown RBP17.22■□□□□ 0.35
CLCN1-203ENST00000455478 TMEM87BQ96K49 555 aa17.22■□□□□ 0.35
CLCN1-203ENST00000455478 MOV10L1Q9BXT6 1211 aaKnown RBP17.22■□□□□ 0.35
CLCN1-203ENST00000455478 SPATC1LQ9H0A9 340 aa17.22■□□□□ 0.35
CLCN1-203ENST00000455478 LY9Q9HBG7 655 aa17.22■□□□□ 0.35
CLCN1-203ENST00000455478 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
CLCN1-203ENST00000455478 SRRDQ9UH36 339 aa17.22■□□□□ 0.35
CLCN1-203ENST00000455478 PTPN22Q9Y2R2 807 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms