RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ZNF532Q9HCE3 1301 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 GOLIM4O00461 696 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 WDR46O15213 610 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 MAP3K13O43283 966 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 FLOT1O75955 427 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 IGHA2P01877 340 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 RLBP1P12271 317 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 FCER1AP12319 257 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 ERCC3P19447 782 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 RTP1P59025 263 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 ICA1Q05084 483 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 PLS1Q14651 629 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 NPLOC4Q8TAT6 608 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 IL1RAPL2Q9NP60 686 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 DCP1AQ9NPI6 582 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 RYDENQ9NUL5 291 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 TMX2Q9Y320 296 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 LAMA3Q16787 3333 aa9.67□□□□□ -0.86
NIF3L1-209ENST00000454952 CUL9Q8IWT3 2517 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 BAZ2AQ9UIF9 1905 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 LTBP2Q14767 1821 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 PARP14Q460N5 1801 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 A0A1W2PRG0 241 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 PSEN1P49768 467 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 ATN1P54259 1190 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 ZNF697Q5TEC3 545 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 C1orf53Q5VUE5 145 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 Q7L0L9 218 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 NCAPG2Q86XI2 1143 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 DNAJC2Q99543 621 aaKnown RBP9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 VCPKMTQ9H867 229 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 KANSL2Q9H9L4 492 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 GOPCQ9HD26 462 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 PAG1Q9NWQ8 432 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 DDX19BQ9UMR2 479 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 ATP11BQ9Y2G3 1177 aa9.66□□□□□ -0.86
NIF3L1-209ENST00000454952 TCRBV5S4A2TA0A5A2 114 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 POTEB2H3BUK9 544 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 RARBP10826 455 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 KCTD2Q14681 263 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 SNX17Q15036 470 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 SLC39A5Q6ZMH5 540 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 RNF180Q86T96 592 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 LCORLQ8N3X6 602 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 TRPV1Q8NER1 839 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 SDR42E1Q8WUS8 393 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 MMP19Q99542 508 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 DIS3Q9Y2L1 958 aaKnown RBP9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 PLXNA1Q9UIW2 1896 aa9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 COL11A1P12107 1806 aaPredicted RBP9.65□□□□□ -0.86
NIF3L1-209ENST00000454952 ROBO3Q96MS0 1386 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 COBLO75128 1261 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 MBD4O95243 580 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 ATP5JP18859 108 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 ADD2P35612 726 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 LRRC41Q15345 812 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 UBE3CQ15386 1083 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 C12orf60Q5U649 245 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 C16orf86Q6ZW13 317 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 RIOX2Q8IUF8 465 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 MSL3Q8N5Y2 521 aaKnown RBP9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 PANK1Q8TE04 598 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 ATG4CQ96DT6 458 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 MAML3Q96JK9 1138 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 HAUS7Q99871 368 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 ARMT1Q9H993 441 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 PRDM5Q9NQX1 630 aaPredicted RBP9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 SMCHD1A6NHR9 2005 aa9.64□□□□□ -0.87
NIF3L1-209ENST00000454952 ZBED9Q6R2W3 1325 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 APBB1O00213 710 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 CYP2D6P10635 497 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 AKR1B1P15121 316 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 ADCYAP1R1P41586 468 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 CDK8P49336 464 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 SMAD3P84022 425 aaKnown RBP9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 TRIM60Q495X7 471 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 SPICE1Q8N0Z3 855 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 SLC44A5Q8NCS7 719 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 XPNPEP3Q9NQH7 507 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 ARPP21Q9UBL0 812 aaPredicted RBP9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 ADAMTS5Q9UNA0 930 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 PHF24Q9UPV7 400 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 CNPY2Q9Y2B0 182 aa9.63□□□□□ -0.87
NIF3L1-209ENST00000454952 TMEM265A0A087WTH1 108 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 USP17L12C9JPN9 530 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 USP17L21D6R901 530 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 VWA5AO00534 786 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 EEF2P13639 858 aaKnown RBP9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 AKR1A1P14550 325 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 STAT3P40763 770 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 TMEM132BQ14DG7 1078 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 GIMAP6Q6P9H5 292 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 SIAH1Q8IUQ4 282 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 NUP133Q8WUM0 1156 aa9.62□□□□□ -0.87
NIF3L1-209ENST00000454952 DYNLL2Q96FJ2 89 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms