RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 PAXIP1Q6ZW49 1069 aaPredicted RBP17.03■□□□□ 0.32
LAMA4-209ENST00000453937 IFNL1Q8IU54 200 aa17.03■□□□□ 0.32
LAMA4-209ENST00000453937 DCAF4Q8WV16 495 aa17.03■□□□□ 0.32
LAMA4-209ENST00000453937 FAM217BQ9NTX9 383 aaPredicted RBP17.03■□□□□ 0.32
LAMA4-209ENST00000453937 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
LAMA4-209ENST00000453937 PALM3A6NDB9 673 aaPredicted RBP17.02■□□□□ 0.32
LAMA4-209ENST00000453937 PLA2G6O60733 806 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 DDAH1O94760 285 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 CD2BP2O95400 341 aaKnown RBP17.02■□□□□ 0.32
LAMA4-209ENST00000453937 BMP3P12645 472 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 RCAN1P53805 252 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 GRM1Q13255 1194 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 GRM4Q14833 912 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 BTNL9Q6UXG8 535 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 IL27Q8NEV9 243 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 MYL10Q9BUA6 226 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 RPAP3Q9H6T3 665 aaPredicted RBP17.02■□□□□ 0.32
LAMA4-209ENST00000453937 ZCCHC17Q9NP64 241 aaKnown RBP17.02■□□□□ 0.32
LAMA4-209ENST00000453937 MAD2L2Q9UI95 211 aa17.02■□□□□ 0.32
LAMA4-209ENST00000453937 A0A0G2JMZ2 1700 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 CCDC69A6NI79 296 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
LAMA4-209ENST00000453937 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 CATIPQ7Z7H3 387 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
LAMA4-209ENST00000453937 STAG2Q8N3U4 1231 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 ZNF274Q96GC6 653 aaPredicted RBP17.01■□□□□ 0.31
LAMA4-209ENST00000453937 LARP6Q9BRS8 491 aaKnown RBP17.01■□□□□ 0.31
LAMA4-209ENST00000453937 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 ADAMTS5Q9UNA0 930 aa17.01■□□□□ 0.31
LAMA4-209ENST00000453937 ADGRA2Q96PE1 1338 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 PDHXO00330 501 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 SLC1A4P43007 532 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 TTBK2Q6IQ55 1244 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 NFXL1Q6ZNB6 911 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 KCTD1Q719H9 257 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 ASCC2Q9H1I8 757 aaPredicted RBP17■□□□□ 0.31
LAMA4-209ENST00000453937 FBXO28Q9NVF7 368 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 SLC12A7Q9Y666 1083 aa17■□□□□ 0.31
LAMA4-209ENST00000453937 LARGE1O95461 756 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 RXRAP19793 462 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 CDC27P30260 824 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 ANKRD1Q15327 319 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 GPATCH4Q5T3I0 446 aaKnown RBP16.99■□□□□ 0.31
LAMA4-209ENST00000453937 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 RAB11FIP4Q86YS3 637 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 FANCBQ8NB91 859 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 CHMP4CQ96CF2 233 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 P2RX7Q99572 595 aaKnown RBP16.99■□□□□ 0.31
LAMA4-209ENST00000453937 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
LAMA4-209ENST00000453937 FRMPD2Q68DX3 1309 aaPredicted RBP16.98■□□□□ 0.31
LAMA4-209ENST00000453937 MYPNQ86TC9 1320 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 SPDYE16A6NNV3 312 aaPredicted RBP16.98■□□□□ 0.31
LAMA4-209ENST00000453937 TMEM232C9JQI7 657 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 ZBTB43O43298 467 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 CAPN15O75808 1086 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 GOLGA8HP0CJ92 632 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 HSPA1AP0DMV8 641 aaKnown RBP16.98■□□□□ 0.31
LAMA4-209ENST00000453937 HSPA1BP0DMV9 641 aaKnown RBP16.98■□□□□ 0.31
LAMA4-209ENST00000453937 CALM1P0DP23 149 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 CALM2P0DP24 149 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 CALM3P0DP25 149 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 DSG3P32926 999 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 FGD1P98174 961 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 FUT2Q10981 343 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 ST3GAL1Q11201 340 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 TNS4Q8IZW8 715 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 REPS2Q8NFH8 660 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 CFHR5Q9BXR6 569 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 GPCPD1Q9NPB8 672 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 FEM1BQ9UK73 627 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 PPP1R9AQ9ULJ8 1098 aa16.98■□□□□ 0.31
LAMA4-209ENST00000453937 GOLGA8BA8MQT2 603 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 CYTH3O43739 400 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 RAD21O60216 631 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 PFKFB2O60825 505 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 PARP1P09874 1014 aaKnown RBP16.97■□□□□ 0.31
LAMA4-209ENST00000453937 PABPC4Q13310 644 aaKnown RBP eCLIP16.97■□□□□ 0.31
LAMA4-209ENST00000453937 COG2Q14746 738 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 ME3Q16798 604 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 MICU3Q86XE3 530 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 NUP133Q8WUM0 1156 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 MTMR8Q96EF0 704 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
LAMA4-209ENST00000453937 COL11A1P12107 1806 aaPredicted RBP16.97■□□□□ 0.31
LAMA4-209ENST00000453937 KLRF2D3W0D1 207 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms