RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 TBC1D25Q3MII6 688 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 EMC10Q5UCC4 262 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 MSL1Q68DK7 614 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 HIBCHQ6NVY1 386 aaPredicted RBP20.82■□□□□ 0.92
PTPA-223ENST00000452489 EHBP1Q8NDI1 1231 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 EHD2Q9NZN4 543 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 HSPD1P10809 573 aaKnown RBP20.82■□□□□ 0.92
PTPA-223ENST00000452489 ELOA2Q8IYF1 753 aaPredicted RBP20.82■□□□□ 0.92
PTPA-223ENST00000452489 STIM2Q9P246 746 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 CCDC61Q9Y6R9 512 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 PALLDQ8WX93 1383 aa20.82■□□□□ 0.92
PTPA-223ENST00000452489 SPATA31D1Q6ZQQ2 1576 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 MACROD2A1Z1Q3 448 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 SLC5A9Q2M3M2 681 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 HAUS3Q68CZ6 603 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 SPATA4Q8NEY3 305 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 PIK3R5Q8WYR1 880 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 TAB2Q9NYJ8 693 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 HAND2P61296 217 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 USP49Q70CQ1 688 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 CCDC47Q96A33 483 aaKnown RBP20.81■□□□□ 0.92
PTPA-223ENST00000452489 HVCN1Q96D96 273 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 ACSBG1Q96GR2 724 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 SEC16BQ96JE7 1060 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 ATP6V1G3Q96LB4 118 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 KDRP35968 1356 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 SH3TC1Q8TE82 1336 aa20.81■□□□□ 0.92
PTPA-223ENST00000452489 PPP1R7Q15435 360 aa20.8■□□□□ 0.92
PTPA-223ENST00000452489 PSMB7Q99436 277 aa20.8■□□□□ 0.92
PTPA-223ENST00000452489 GMNCA6NCL1 334 aa20.8■□□□□ 0.92
PTPA-223ENST00000452489 ACTN4O43707 911 aaKnown RBP20.8■□□□□ 0.92
PTPA-223ENST00000452489 UPP2O95045 317 aa20.8■□□□□ 0.92
PTPA-223ENST00000452489 DPYDQ12882 1025 aa20.8■□□□□ 0.92
PTPA-223ENST00000452489 SPATA20Q8TB22 786 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 DBNDD2Q9BQY9 259 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 KCNQ3O43525 872 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 PRC1O43663 620 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 AFMP43652 599 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 LACTB2Q53H82 288 aaPredicted RBP20.79■□□□□ 0.92
PTPA-223ENST00000452489 SMCR8Q8TEV9 937 aaPredicted RBP20.79■□□□□ 0.92
PTPA-223ENST00000452489 TCP11Q8WWU5 503 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 NFU1Q9UMS0 254 aa20.79■□□□□ 0.92
PTPA-223ENST00000452489 TTC26A0AVF1 554 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 ESYT3A0FGR9 886 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 ZSCAN5CA6NGD5 496 aaPredicted RBP20.78■□□□□ 0.92
PTPA-223ENST00000452489 TTC36A6NLP5 189 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 KRT86O43790 486 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 DNAJC8O75937 253 aaPredicted RBP20.78■□□□□ 0.92
PTPA-223ENST00000452489 PYGLP06737 847 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 RXRAP19793 462 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 GUCY2FP51841 1108 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 PHKBQ93100 1093 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 RFX7Q2KHR2 1363 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 EIF4E1BA6NMX2 242 aaKnown RBP20.78■□□□□ 0.92
PTPA-223ENST00000452489 GRM8O00222 908 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 LINGO3P0C6S8 592 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 CXCR5P32302 372 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 PRPHP41219 470 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 CARSP49589 748 aaKnown RBP20.78■□□□□ 0.92
PTPA-223ENST00000452489 TNNI3KQ59H18 835 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 PPP4R3AQ6IN85 833 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 SNX12Q9UMY4 172 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 CTNND2Q9UQB3 1225 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 FPGT-TNNI3KV9GXZ4 949 aa20.78■□□□□ 0.92
PTPA-223ENST00000452489 ANO9A1A5B4 782 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 UBE2Q2LH0YL09 131 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 TMOD1P28289 359 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 EIF4A1P60842 406 aaKnown RBP20.77■□□□□ 0.92
PTPA-223ENST00000452489 TFCP2Q12800 502 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 WDR59Q6PJI9 974 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 KBTBD3Q8NAB2 608 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 CCT6BQ92526 530 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 HAUS7Q99871 368 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 FBXO2Q9UK22 296 aaPredicted RBP20.77■□□□□ 0.92
PTPA-223ENST00000452489 CORO1CQ9ULV4 474 aaPredicted RBP20.77■□□□□ 0.92
PTPA-223ENST00000452489 CLTAP09496 248 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 MYBL1P10243 752 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 COPB1P53618 953 aaKnown RBP20.77■□□□□ 0.92
PTPA-223ENST00000452489 PROSER3Q2NL68 480 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 CACNA2D3Q8IZS8 1091 aa20.77■□□□□ 0.92
PTPA-223ENST00000452489 ERICH2A1L162 156 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 PPP1R3GB7ZBB8 358 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 TRAPPC3O43617 180 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 GLE1Q53GS7 698 aaKnown RBP20.76■□□□□ 0.91
PTPA-223ENST00000452489 PNMA8AQ86V59 439 aaPredicted RBP20.76■□□□□ 0.91
PTPA-223ENST00000452489 DRAXINQ8NBI3 349 aaPredicted RBP20.76■□□□□ 0.91
PTPA-223ENST00000452489 TRIM58Q8NG06 486 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 RUBCNQ92622 972 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 SEMA3EO15041 775 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 KIF4AO95239 1232 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 PDCD2Q16342 344 aaPredicted RBP20.76■□□□□ 0.91
PTPA-223ENST00000452489 FBXL16Q8N461 479 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 IFT81Q8WYA0 676 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 PCDHGC5Q9Y5F6 944 aa20.76■□□□□ 0.91
PTPA-223ENST00000452489 SRRM3A6NNA2 597 aaPredicted RBP20.75■□□□□ 0.91
PTPA-223ENST00000452489 HMGB1P1B2RPK0 211 aaPredicted RBP20.75■□□□□ 0.91
PTPA-223ENST00000452489 DIAPH2O60879 1101 aa20.75■□□□□ 0.91
PTPA-223ENST00000452489 VAV2P52735 878 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms