RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 POTEEQ6S8J3 1075 aa23.56■■□□□ 1.36
COL9A3-202ENST00000452372 CASC1Q6TDU7 716 aa23.56■■□□□ 1.36
COL9A3-202ENST00000452372 SPICE1Q8N0Z3 855 aa23.56■■□□□ 1.36
COL9A3-202ENST00000452372 TCP11L1Q9NUJ3 509 aa23.56■■□□□ 1.36
COL9A3-202ENST00000452372 F5H6K3 240 aa23.55■■□□□ 1.36
COL9A3-202ENST00000452372 WDR46O15213 610 aaKnown RBP23.55■■□□□ 1.36
COL9A3-202ENST00000452372 NOVP48745 357 aa23.55■■□□□ 1.36
COL9A3-202ENST00000452372 UBXN2AP68543 259 aa23.55■■□□□ 1.36
COL9A3-202ENST00000452372 KLRC3Q07444 240 aa23.55■■□□□ 1.36
COL9A3-202ENST00000452372 GTF3C2Q8WUA4 911 aaPredicted RBP23.55■■□□□ 1.36
COL9A3-202ENST00000452372 ESR2Q92731 530 aa23.55■■□□□ 1.36
COL9A3-202ENST00000452372 LSG1Q9H089 658 aaKnown RBP23.55■■□□□ 1.36
COL9A3-202ENST00000452372 MORF4L1Q9UBU8 362 aa23.55■■□□□ 1.36
COL9A3-202ENST00000452372 NMT2O60551 498 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 COG2Q14746 738 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 HABP4Q5JVS0 413 aaKnown RBP23.54■■□□□ 1.36
COL9A3-202ENST00000452372 LBX2Q6XYB7 198 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 NKX2-3Q8TAU0 364 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 COA7Q96BR5 231 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 TXNRD2Q9NNW7 524 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 HOXC10Q9NYD6 342 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 RBPJLQ9UBG7 517 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 STX8Q9UNK0 236 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 NEDD4P46934 1319 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 PLXNB2O15031 1838 aa23.54■■□□□ 1.36
COL9A3-202ENST00000452372 INHAP05111 366 aa23.53■■□□□ 1.36
COL9A3-202ENST00000452372 CYP21A2P08686 494 aa23.53■■□□□ 1.36
COL9A3-202ENST00000452372 TANGO6Q9C0B7 1094 aa23.53■■□□□ 1.36
COL9A3-202ENST00000452372 RBM8AQ9Y5S9 174 aaKnown RBP23.53■■□□□ 1.36
COL9A3-202ENST00000452372 RAD21O60216 631 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 SGPL1O95470 568 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 NDUFB10O96000 172 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 LRRC47Q8N1G4 583 aaKnown RBP23.52■■□□□ 1.36
COL9A3-202ENST00000452372 GMCL1P1Q8NEA9 526 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 U2AF1L4Q8WU68 220 aaKnown RBP23.52■■□□□ 1.36
COL9A3-202ENST00000452372 KRT23Q9C075 422 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 CNNM2Q9H8M5 875 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 RLFQ13129 1914 aa23.52■■□□□ 1.36
COL9A3-202ENST00000452372 SPDYE16A6NNV3 312 aaPredicted RBP23.51■■□□□ 1.35
COL9A3-202ENST00000452372 KDM4AO75164 1064 aa23.51■■□□□ 1.35
COL9A3-202ENST00000452372 Q3C1V9 767 aa23.51■■□□□ 1.35
COL9A3-202ENST00000452372 TTC14Q96N46 770 aa23.51■■□□□ 1.35
COL9A3-202ENST00000452372 ANO2Q9NQ90 1003 aa23.51■■□□□ 1.35
COL9A3-202ENST00000452372 RABGAP1Q9Y3P9 1069 aa23.51■■□□□ 1.35
COL9A3-202ENST00000452372 TRIOBPQ9H2D6 2365 aa23.51■■□□□ 1.35
COL9A3-202ENST00000452372 B4E1Z4 1266 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 H0YGN5 161 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 FLOT1O75955 427 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 DSG3P32926 999 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 FAM83BQ5T0W9 1011 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 GPRC5AQ8NFJ5 357 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 PAK6Q9NQU5 681 aaPredicted RBP23.5■■□□□ 1.35
COL9A3-202ENST00000452372 ZSWIM5Q9P217 1185 aa23.5■■□□□ 1.35
COL9A3-202ENST00000452372 ERVK-9P63128 1117 aa23.49■■□□□ 1.35
COL9A3-202ENST00000452372 ERVK-24P63145 666 aa23.49■■□□□ 1.35
COL9A3-202ENST00000452372 SLFN13Q68D06 897 aa23.49■■□□□ 1.35
COL9A3-202ENST00000452372 PAGR1Q9BTK6 254 aa23.49■■□□□ 1.35
COL9A3-202ENST00000452372 PARP14Q460N5 1801 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 CNMDO75829 334 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 TOP1P11387 765 aaKnown RBP23.48■■□□□ 1.35
COL9A3-202ENST00000452372 TRDNQ13061 729 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 CCDC178Q5BJE1 867 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 RCSD1Q6JBY9 416 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 IQCA1Q86XH1 822 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 NUP88Q99567 741 aaPredicted RBP23.48■■□□□ 1.35
COL9A3-202ENST00000452372 TMEM47Q9BQJ4 181 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 CRISPLD2Q9H0B8 497 aa23.48■■□□□ 1.35
COL9A3-202ENST00000452372 COLQQ9Y215 455 aaPredicted RBP23.48■■□□□ 1.35
COL9A3-202ENST00000452372 RANBP2P49792 3224 aaKnown RBP23.47■■□□□ 1.35
COL9A3-202ENST00000452372 E7EWF7 191 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 TRIM32Q13049 653 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 NECTIN1Q15223 517 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 DGKHQ86XP1 1220 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 GMCL1Q96IK5 515 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 DEFB118Q96PH6 123 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 ZKSCAN3Q9BRR0 538 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 BTBD7Q9P203 1132 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 ADAMTS5Q9UNA0 930 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 TAF6LQ9Y6J9 622 aa23.47■■□□□ 1.35
COL9A3-202ENST00000452372 BMP3P12645 472 aa23.46■■□□□ 1.35
COL9A3-202ENST00000452372 MB21D1Q8N884 522 aa23.46■■□□□ 1.35
COL9A3-202ENST00000452372 ANKS1AQ92625 1134 aa23.46■■□□□ 1.35
COL9A3-202ENST00000452372 ATG4CQ96DT6 458 aa23.46■■□□□ 1.35
COL9A3-202ENST00000452372 ZSCAN10Q96SZ4 725 aaPredicted RBP23.46■■□□□ 1.35
COL9A3-202ENST00000452372 PPP1R9AQ9ULJ8 1098 aa23.46■■□□□ 1.35
COL9A3-202ENST00000452372 STOX1Q6ZVD7 989 aa23.45■■□□□ 1.34
COL9A3-202ENST00000452372 USP6NLQ92738 828 aa23.45■■□□□ 1.34
COL9A3-202ENST00000452372 SLF1Q9BQI6 1058 aa23.45■■□□□ 1.34
COL9A3-202ENST00000452372 PORCNQ9H237 461 aa23.45■■□□□ 1.34
COL9A3-202ENST00000452372 SLC27A2O14975 620 aa23.44■■□□□ 1.34
COL9A3-202ENST00000452372 FARP2O94887 1054 aaPredicted RBP23.44■■□□□ 1.34
COL9A3-202ENST00000452372 TFRCP02786 760 aaKnown RBP23.44■■□□□ 1.34
COL9A3-202ENST00000452372 MCCP23508 829 aa23.44■■□□□ 1.34
COL9A3-202ENST00000452372 SLC1A4P43007 532 aa23.44■■□□□ 1.34
COL9A3-202ENST00000452372 CCNA1P78396 465 aa23.44■■□□□ 1.34
COL9A3-202ENST00000452372 CREB3L3Q68CJ9 461 aa23.44■■□□□ 1.34
COL9A3-202ENST00000452372 PRPF38AQ8NAV1 312 aaKnown RBP23.44■■□□□ 1.34
COL9A3-202ENST00000452372 NCOA7Q8NI08 942 aa23.44■■□□□ 1.34
COL9A3-202ENST00000452372 DPF3Q92784 378 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms