RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 IFNL3Q8IZI9 196 aa25.75■■□□□ 1.71
C9orf3-208ENST00000451893 SHCBP1Q8NEM2 672 aa25.75■■□□□ 1.71
C9orf3-208ENST00000451893 MROH8Q9H579 483 aa25.75■■□□□ 1.71
C9orf3-208ENST00000451893 A0A0G2JMZ2 1700 aa25.74■■□□□ 1.71
C9orf3-208ENST00000451893 ROBO3Q96MS0 1386 aa25.74■■□□□ 1.71
C9orf3-208ENST00000451893 RASA1P20936 1047 aa25.74■■□□□ 1.71
C9orf3-208ENST00000451893 ADORA2AP29274 412 aa25.74■■□□□ 1.71
C9orf3-208ENST00000451893 FAM83BQ5T0W9 1011 aa25.74■■□□□ 1.71
C9orf3-208ENST00000451893 SIAH1Q8IUQ4 282 aa25.74■■□□□ 1.71
C9orf3-208ENST00000451893 EPB41L4AQ9HCS5 686 aaPredicted RBP25.74■■□□□ 1.71
C9orf3-208ENST00000451893 CEP290O15078 2479 aa25.73■■□□□ 1.71
C9orf3-208ENST00000451893 COL11A1P12107 1806 aaPredicted RBP25.73■■□□□ 1.71
C9orf3-208ENST00000451893 PRDM1O75626 825 aa25.73■■□□□ 1.71
C9orf3-208ENST00000451893 TSPY3P0CV98 308 aa25.73■■□□□ 1.71
C9orf3-208ENST00000451893 TSPY8P0CW00 308 aa25.73■■□□□ 1.71
C9orf3-208ENST00000451893 SEC62Q99442 399 aaKnown RBP25.73■■□□□ 1.71
C9orf3-208ENST00000451893 OGDHLQ9ULD0 1010 aa25.73■■□□□ 1.71
C9orf3-208ENST00000451893 RLFQ13129 1914 aa25.73■■□□□ 1.71
C9orf3-208ENST00000451893 PARP14Q460N5 1801 aa25.72■■□□□ 1.71
C9orf3-208ENST00000451893 SLC25A27O95847 323 aa25.72■■□□□ 1.71
C9orf3-208ENST00000451893 EVI5LQ96CN4 794 aa25.72■■□□□ 1.71
C9orf3-208ENST00000451893 CLIP2Q9UDT6 1046 aa25.72■■□□□ 1.71
C9orf3-208ENST00000451893 MSCO60682 206 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 HOXC6P09630 235 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 FCER1AP12319 257 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 ZMYM1Q5SVZ6 1142 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 C7orf61Q8IZ16 206 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 NPLOC4Q8TAT6 608 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 FLRT1Q9NZU1 646 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 NYAP2Q9P242 653 aa25.71■■□□□ 1.71
C9orf3-208ENST00000451893 CYP2C19P33261 490 aa25.7■■□□□ 1.7
C9orf3-208ENST00000451893 MMP19Q99542 508 aa25.7■■□□□ 1.7
C9orf3-208ENST00000451893 FBXO28Q9NVF7 368 aa25.7■■□□□ 1.7
C9orf3-208ENST00000451893 PPP1R9AQ9ULJ8 1098 aa25.7■■□□□ 1.7
C9orf3-208ENST00000451893 GREB1LQ9C091 1923 aaPredicted RBP25.7■■□□□ 1.7
C9orf3-208ENST00000451893 ZNF236Q9UL36 1845 aa25.7■■□□□ 1.7
C9orf3-208ENST00000451893 TRIM6-TRIM34B2RNG4 842 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 COPB2P35606 906 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 SLC4A3P48751 1232 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 PPARAQ07869 468 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 KCTD2Q14681 263 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 TMEM132BQ14DG7 1078 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 SLF1Q9BQI6 1058 aa25.69■■□□□ 1.7
C9orf3-208ENST00000451893 FRMPD3Q5JV73 1810 aa25.68■■□□□ 1.7
C9orf3-208ENST00000451893 F5H6K3 240 aa25.68■■□□□ 1.7
C9orf3-208ENST00000451893 TTLL1O95922 423 aa25.68■■□□□ 1.7
C9orf3-208ENST00000451893 STAT3P40763 770 aa25.68■■□□□ 1.7
C9orf3-208ENST00000451893 KLRC3Q07444 240 aa25.68■■□□□ 1.7
C9orf3-208ENST00000451893 NUP88Q99567 741 aaPredicted RBP25.68■■□□□ 1.7
C9orf3-208ENST00000451893 LNPKQ9C0E8 428 aa25.68■■□□□ 1.7
C9orf3-208ENST00000451893 DDX20Q9UHI6 824 aaKnown RBP25.68■■□□□ 1.7
C9orf3-208ENST00000451893 ZNFX1Q9P2E3 1918 aaKnown RBP25.68■■□□□ 1.7
C9orf3-208ENST00000451893 ALPK3Q96L96 1907 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 VWA5AO00534 786 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 MYCNP04198 464 aaPredicted RBP25.67■■□□□ 1.7
C9orf3-208ENST00000451893 PDE1AP54750 535 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 PPP4R3BQ5MIZ7 849 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 OLFML2BQ68BL8 750 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 CCDC129Q6ZRS4 1044 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 ABRAQ8N0Z2 381 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 CEP95Q96GE4 821 aa25.67■■□□□ 1.7
C9orf3-208ENST00000451893 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.67■■□□□ 1.7
C9orf3-208ENST00000451893 NDUFB10O96000 172 aa25.66■■□□□ 1.7
C9orf3-208ENST00000451893 IKQ13123 557 aaPredicted RBP25.66■■□□□ 1.7
C9orf3-208ENST00000451893 LRRC47Q8N1G4 583 aaKnown RBP25.66■■□□□ 1.7
C9orf3-208ENST00000451893 RILPL2Q969X0 211 aa25.66■■□□□ 1.7
C9orf3-208ENST00000451893 TOMM22Q9NS69 142 aa25.66■■□□□ 1.7
C9orf3-208ENST00000451893 TSPY2A6NKD2 308 aa25.65■■□□□ 1.7
C9orf3-208ENST00000451893 ZBED4O75132 1171 aa25.65■■□□□ 1.7
C9orf3-208ENST00000451893 TFAP4Q01664 338 aa25.65■■□□□ 1.7
C9orf3-208ENST00000451893 FAM47AQ5JRC9 791 aa25.65■■□□□ 1.7
C9orf3-208ENST00000451893 RIOX2Q8IUF8 465 aa25.65■■□□□ 1.7
C9orf3-208ENST00000451893 KIFC2Q96AC6 838 aa25.65■■□□□ 1.7
C9orf3-208ENST00000451893 RBM27Q9P2N5 1060 aaKnown RBP25.65■■□□□ 1.7
C9orf3-208ENST00000451893 ZMYND8Q9ULU4 1186 aaPredicted RBP25.65■■□□□ 1.7
C9orf3-208ENST00000451893 LHX8Q68G74 356 aa25.64■■□□□ 1.7
C9orf3-208ENST00000451893 SNRNP48Q6IEG0 339 aaKnown RBP25.64■■□□□ 1.7
C9orf3-208ENST00000451893 PRPF38AQ8NAV1 312 aaKnown RBP25.64■■□□□ 1.7
C9orf3-208ENST00000451893 HELLSQ9NRZ9 838 aa25.64■■□□□ 1.7
C9orf3-208ENST00000451893 MTMR4Q9NYA4 1195 aa25.64■■□□□ 1.7
C9orf3-208ENST00000451893 STAP2Q9UGK3 403 aa25.64■■□□□ 1.7
C9orf3-208ENST00000451893 SALL3Q9BXA9 1300 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 COBLO75128 1261 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 CPXCR1Q8N123 301 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 NEDD1Q8NHV4 660 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 TEX13BQ9BXU2 312 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 FEM1BQ9UK73 627 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 PLXNA1Q9UIW2 1896 aa25.63■■□□□ 1.69
C9orf3-208ENST00000451893 CYBAP13498 195 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 FXR1P51114 621 aaKnown RBP eCLIP25.62■■□□□ 1.69
C9orf3-208ENST00000451893 NUCB1Q02818 461 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 CTDSPL2Q05D32 466 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 SLFN13Q68D06 897 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 DDX11Q96FC9 970 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 MAML3Q96JK9 1138 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 SENP6Q9GZR1 1112 aaPredicted RBP25.62■■□□□ 1.69
C9orf3-208ENST00000451893 SYNPO2Q9UMS6 1093 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 ADAMTS5Q9UNA0 930 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 STX8Q9UNK0 236 aa25.62■■□□□ 1.69
C9orf3-208ENST00000451893 IGKV6D-41A0A0C4DH26 115 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms