RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 RASA1P20936 1047 aa32.47■■■□□ 2.79
USP42-204ENST00000451154 OLFML2BQ68BL8 750 aa32.47■■■□□ 2.79
USP42-204ENST00000451154 FRMPD3Q5JV73 1810 aa32.47■■■□□ 2.79
USP42-204ENST00000451154 M0R2C6 588 aa32.46■■■□□ 2.79
USP42-204ENST00000451154 CYBAP13498 195 aa32.46■■■□□ 2.79
USP42-204ENST00000451154 FAM83BQ5T0W9 1011 aa32.46■■■□□ 2.79
USP42-204ENST00000451154 OTUD7AQ8TE49 926 aaPredicted RBP32.46■■■□□ 2.79
USP42-204ENST00000451154 SENP6Q9GZR1 1112 aaPredicted RBP32.46■■■□□ 2.79
USP42-204ENST00000451154 COL11A1P12107 1806 aaPredicted RBP32.46■■■□□ 2.79
USP42-204ENST00000451154 SOX1O00570 391 aaPredicted RBP32.45■■■□□ 2.79
USP42-204ENST00000451154 MSCO60682 206 aa32.45■■■□□ 2.79
USP42-204ENST00000451154 APPP05067 770 aa32.45■■■□□ 2.79
USP42-204ENST00000451154 BMP8BP34820 402 aa32.45■■■□□ 2.79
USP42-204ENST00000451154 MAGEA10P43363 369 aaPredicted RBP32.45■■■□□ 2.79
USP42-204ENST00000451154 ABRAQ8N0Z2 381 aa32.45■■■□□ 2.79
USP42-204ENST00000451154 EPB41L4AQ9HCS5 686 aaPredicted RBP32.45■■■□□ 2.79
USP42-204ENST00000451154 SLC5A4Q9NY91 659 aa32.45■■■□□ 2.79
USP42-204ENST00000451154 SLC25A27O95847 323 aa32.44■■■□□ 2.78
USP42-204ENST00000451154 FCER1AP12319 257 aa32.44■■■□□ 2.78
USP42-204ENST00000451154 PRAMEF19Q5SWL8 479 aa32.44■■■□□ 2.78
USP42-204ENST00000451154 PPP1R9AQ9ULJ8 1098 aa32.44■■■□□ 2.78
USP42-204ENST00000451154 ZNF236Q9UL36 1845 aa32.43■■■□□ 2.78
USP42-204ENST00000451154 VWA5AO00534 786 aa32.43■■■□□ 2.78
USP42-204ENST00000451154 GNAT2P19087 354 aa32.43■■■□□ 2.78
USP42-204ENST00000451154 TDO2P48775 406 aa32.43■■■□□ 2.78
USP42-204ENST00000451154 ANO1Q5XXA6 986 aa32.43■■■□□ 2.78
USP42-204ENST00000451154 NUP88Q99567 741 aaPredicted RBP32.43■■■□□ 2.78
USP42-204ENST00000451154 TTC41PQ6P2S7 1318 aa32.43■■■□□ 2.78
USP42-204ENST00000451154 PATL2C9JE40 543 aaKnown RBP32.42■■■□□ 2.78
USP42-204ENST00000451154 STAT3P40763 770 aa32.42■■■□□ 2.78
USP42-204ENST00000451154 PI4K2BQ8TCG2 481 aa32.42■■■□□ 2.78
USP42-204ENST00000451154 SEC62Q99442 399 aaKnown RBP32.42■■■□□ 2.78
USP42-204ENST00000451154 NYAP2Q9P242 653 aa32.42■■■□□ 2.78
USP42-204ENST00000451154 ERC2O15083 957 aa32.41■■■□□ 2.78
USP42-204ENST00000451154 PRDM1O75626 825 aa32.41■■■□□ 2.78
USP42-204ENST00000451154 LRCH3Q96II8 777 aa32.41■■■□□ 2.78
USP42-204ENST00000451154 MAML3Q96JK9 1138 aa32.41■■■□□ 2.78
USP42-204ENST00000451154 CLIP2Q9UDT6 1046 aa32.41■■■□□ 2.78
USP42-204ENST00000451154 GREB1LQ9C091 1923 aaPredicted RBP32.4■■■□□ 2.78
USP42-204ENST00000451154 LRRFIP1Q32MZ4 808 aaKnown RBP32.4■■■□□ 2.78
USP42-204ENST00000451154 GJC2Q5T442 439 aaPredicted RBP32.4■■■□□ 2.78
USP42-204ENST00000451154 RIOX2Q8IUF8 465 aa32.4■■■□□ 2.78
USP42-204ENST00000451154 IFNL3Q8IZI9 196 aa32.4■■■□□ 2.78
USP42-204ENST00000451154 ZNF444Q8N0Y2 327 aaPredicted RBP32.4■■■□□ 2.78
USP42-204ENST00000451154 MMP19Q99542 508 aa32.4■■■□□ 2.78
USP42-204ENST00000451154 SMCHD1A6NHR9 2005 aa32.39■■■□□ 2.78
USP42-204ENST00000451154 F5H6K3 240 aa32.39■■■□□ 2.78
USP42-204ENST00000451154 PGK2P07205 417 aa32.39■■■□□ 2.78
USP42-204ENST00000451154 ATN1P54259 1190 aaPredicted RBP32.39■■■□□ 2.78
USP42-204ENST00000451154 KLRC3Q07444 240 aa32.39■■■□□ 2.78
USP42-204ENST00000451154 REPS2Q8NFH8 660 aa32.39■■■□□ 2.78
USP42-204ENST00000451154 ROBO3Q96MS0 1386 aa32.39■■■□□ 2.78
USP42-204ENST00000451154 DNM1LO00429 736 aa32.38■■■□□ 2.77
USP42-204ENST00000451154 SEPT4O43236 478 aa32.38■■■□□ 2.77
USP42-204ENST00000451154 FSD1Q9BTV5 496 aa32.38■■■□□ 2.77
USP42-204ENST00000451154 ZNF214Q9UL59 606 aaPredicted RBP32.38■■■□□ 2.77
USP42-204ENST00000451154 IGKV6D-41A0A0C4DH26 115 aa32.37■■■□□ 2.77
USP42-204ENST00000451154 NDUFB10O96000 172 aa32.37■■■□□ 2.77
USP42-204ENST00000451154 ARRDC4Q8NCT1 418 aa32.37■■■□□ 2.77
USP42-204ENST00000451154 UBE2OQ9C0C9 1292 aaKnown RBP32.37■■■□□ 2.77
USP42-204ENST00000451154 MYCNP04198 464 aaPredicted RBP32.36■■■□□ 2.77
USP42-204ENST00000451154 RRP1P56182 461 aaKnown RBP32.36■■■□□ 2.77
USP42-204ENST00000451154 SLF1Q9BQI6 1058 aa32.36■■■□□ 2.77
USP42-204ENST00000451154 ZNF287Q9HBT7 754 aa32.36■■■□□ 2.77
USP42-204ENST00000451154 MX1P20591 662 aa32.35■■■□□ 2.77
USP42-204ENST00000451154 KCTD2Q14681 263 aa32.35■■■□□ 2.77
USP42-204ENST00000451154 NACAP1Q9BZK3 213 aa32.35■■■□□ 2.77
USP42-204ENST00000451154 MYH4Q9Y623 1939 aa32.34■■■□□ 2.77
USP42-204ENST00000451154 MDM2Q00987 491 aaPredicted RBP32.34■■■□□ 2.77
USP42-204ENST00000451154 ZMYM1Q5SVZ6 1142 aa32.34■■■□□ 2.77
USP42-204ENST00000451154 CEP95Q96GE4 821 aa32.34■■■□□ 2.77
USP42-204ENST00000451154 ZNF792Q3KQV3 632 aa32.33■■■□□ 2.77
USP42-204ENST00000451154 PRPF38AQ8NAV1 312 aaKnown RBP32.33■■■□□ 2.77
USP42-204ENST00000451154 MKL1Q969V6 931 aa32.33■■■□□ 2.77
USP42-204ENST00000451154 CRBNQ96SW2 442 aa32.33■■■□□ 2.77
USP42-204ENST00000451154 MTMR4Q9NYA4 1195 aa32.33■■■□□ 2.77
USP42-204ENST00000451154 SLC4A3P48751 1232 aa32.32■■■□□ 2.76
USP42-204ENST00000451154 ANKRD45Q5TZF3 282 aa32.32■■■□□ 2.76
USP42-204ENST00000451154 TDHQ8IZJ6 230 aa32.32■■■□□ 2.76
USP42-204ENST00000451154 RIPK3Q9Y572 518 aa32.32■■■□□ 2.76
USP42-204ENST00000451154 PLXNA1Q9UIW2 1896 aa32.31■■■□□ 2.76
USP42-204ENST00000451154 KBTBD13C9JR72 458 aa32.31■■■□□ 2.76
USP42-204ENST00000451154 COPB2P35606 906 aa32.31■■■□□ 2.76
USP42-204ENST00000451154 FAM47AQ5JRC9 791 aa32.31■■■□□ 2.76
USP42-204ENST00000451154 SNRNP48Q6IEG0 339 aaKnown RBP32.31■■■□□ 2.76
USP42-204ENST00000451154 TINF2Q9BSI4 451 aa32.31■■■□□ 2.76
USP42-204ENST00000451154 NAPBQ9H115 298 aa32.31■■■□□ 2.76
USP42-204ENST00000451154 DIS3Q9Y2L1 958 aaKnown RBP32.31■■■□□ 2.76
USP42-204ENST00000451154 TAL1P17542 331 aaPredicted RBP32.3■■■□□ 2.76
USP42-204ENST00000451154 RTP1P59025 263 aa32.3■■■□□ 2.76
USP42-204ENST00000451154 PDE4BQ07343 736 aa32.3■■■□□ 2.76
USP42-204ENST00000451154 SLC39A5Q6ZMH5 540 aa32.3■■■□□ 2.76
USP42-204ENST00000451154 CPXCR1Q8N123 301 aa32.3■■■□□ 2.76
USP42-204ENST00000451154 LRRC47Q8N1G4 583 aaKnown RBP32.3■■■□□ 2.76
USP42-204ENST00000451154 KIFC2Q96AC6 838 aa32.3■■■□□ 2.76
USP42-204ENST00000451154 TEX13BQ9BXU2 312 aa32.3■■■□□ 2.76
USP42-204ENST00000451154 TTLL1O95922 423 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 TSPY3P0CV98 308 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 TSPY8P0CW00 308 aa32.29■■■□□ 2.76
USP42-204ENST00000451154 TFAP4Q01664 338 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms