RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 FZD1Q9UP38 647 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 CLEC11AQ9Y240 323 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 hCG_1642624A0A1W2PR95 340 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 CYTH3O43739 400 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 NDUFB10O96000 172 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 SLC1A4P43007 532 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 SLC35G1Q2M3R5 365 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 OTUD7BQ6GQQ9 843 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 CDCA5Q96FF9 252 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 GMCL1Q96IK5 515 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 GOPCQ9HD26 462 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 GJB4Q9NTQ9 266 aa25.74■■□□□ 1.71
SEMA3F-207ENST00000450338 USP2O75604 605 aaPredicted RBP25.73■■□□□ 1.71
SEMA3F-207ENST00000450338 CCDC84Q86UT8 332 aaPredicted RBP25.73■■□□□ 1.71
SEMA3F-207ENST00000450338 FERMT3Q86UX7 667 aa25.73■■□□□ 1.71
SEMA3F-207ENST00000450338 GLIS2Q9BZE0 524 aaPredicted RBP25.73■■□□□ 1.71
SEMA3F-207ENST00000450338 ATP6V1DQ9Y5K8 247 aa25.73■■□□□ 1.71
SEMA3F-207ENST00000450338 TCHHQ07283 1943 aa25.73■■□□□ 1.71
SEMA3F-207ENST00000450338 PPP1R12BO60237 982 aaPredicted RBP25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 NF2P35240 595 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 PRKG1Q13976 671 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 KRT40Q6A162 431 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 KCTD1Q719H9 257 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 PIBF1Q8WXW3 757 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 ZKSCAN4Q969J2 545 aaPredicted RBP25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 UBA5Q9GZZ9 404 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 CPVLQ9H3G5 476 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 PICK1Q9NRD5 415 aa25.72■■□□□ 1.71
SEMA3F-207ENST00000450338 BAG4O95429 457 aaKnown RBP25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 XBP1P17861 261 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 PFKFB3Q16875 520 aaPredicted RBP25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 RIOX1Q9H6W3 641 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 ISY1Q9ULR0 285 aaKnown RBP25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 POTEIP0CG38 1075 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 POTEJP0CG39 1038 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 SCG2P13521 617 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 NOL9Q5SY16 702 aaKnown RBP25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 MCTP1Q6DN14 999 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 ZSCAN16Q9H4T2 348 aaPredicted RBP25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 VCPKMTQ9H867 229 aa25.71■■□□□ 1.71
SEMA3F-207ENST00000450338 RESTQ13127 1097 aa25.7■■□□□ 1.7
SEMA3F-207ENST00000450338 NFKBIBQ15653 356 aa25.7■■□□□ 1.7
SEMA3F-207ENST00000450338 TTBK2Q6IQ55 1244 aa25.7■■□□□ 1.7
SEMA3F-207ENST00000450338 RRP36Q96EU6 259 aaKnown RBP25.7■■□□□ 1.7
SEMA3F-207ENST00000450338 BMP3P12645 472 aa25.69■■□□□ 1.7
SEMA3F-207ENST00000450338 FEZ1Q99689 392 aa25.69■■□□□ 1.7
SEMA3F-207ENST00000450338 VAT1LQ9HCJ6 419 aa25.69■■□□□ 1.7
SEMA3F-207ENST00000450338 PHIPQ8WWQ0 1821 aa25.69■■□□□ 1.7
SEMA3F-207ENST00000450338 PTPRAP18433 802 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 MAP3K9P80192 1104 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 FOXD4L6Q3SYB3 417 aaPredicted RBP25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 FOXD4L3Q6VB84 417 aaPredicted RBP25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 SPICE1Q8N0Z3 855 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 NUP88Q99567 741 aaPredicted RBP25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 AS3MTQ9HBK9 375 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 PAPPA2Q9BXP8 1791 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 OTOFQ9HC10 1997 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 ZYXQ15942 572 aaKnown RBP25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 KIAA1755Q5JYT7 1200 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 WDR18Q9BV38 432 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 KIAA1683Q9H0B3 1180 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 VPS54Q9P1Q0 977 aa25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 SEC63Q9UGP8 760 aaKnown RBP25.68■■□□□ 1.7
SEMA3F-207ENST00000450338 MYH15Q9Y2K3 1946 aa25.67■■□□□ 1.7
SEMA3F-207ENST00000450338 SLC16A2P36021 539 aa25.67■■□□□ 1.7
SEMA3F-207ENST00000450338 IREB2P48200 963 aaKnown RBP25.67■■□□□ 1.7
SEMA3F-207ENST00000450338 ADGRF4Q8IZF3 695 aa25.67■■□□□ 1.7
SEMA3F-207ENST00000450338 PIGSQ96S52 555 aa25.67■■□□□ 1.7
SEMA3F-207ENST00000450338 KCNJ14Q9UNX9 436 aa25.67■■□□□ 1.7
SEMA3F-207ENST00000450338 MMP1P03956 469 aa25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 MCM4P33991 863 aa25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 KIF23Q02241 960 aaPredicted RBP25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 SAFBQ15424 915 aaKnown RBP eCLIP25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 MAP1SQ66K74 1059 aaPredicted RBP25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 LDHDQ86WU2 507 aa25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 HOMER1Q86YM7 354 aa25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 JMJD4Q9H9V9 463 aa25.66■■□□□ 1.7
SEMA3F-207ENST00000450338 USP17L10C9JJH3 530 aa25.65■■□□□ 1.7
SEMA3F-207ENST00000450338 CHAMP1Q96JM3 812 aa25.65■■□□□ 1.7
SEMA3F-207ENST00000450338 NMRK2Q9NPI5 230 aa25.65■■□□□ 1.7
SEMA3F-207ENST00000450338 SH3GLB2Q9NR46 395 aa25.65■■□□□ 1.7
SEMA3F-207ENST00000450338 TMEM232C9JQI7 657 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 VGLL4Q14135 290 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 ZNF280CQ8ND82 737 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 SHISA4Q96DD7 197 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 PHF20Q9BVI0 1012 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 CSADQ9Y600 493 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 ZHX2Q9Y6X8 837 aa25.64■■□□□ 1.7
SEMA3F-207ENST00000450338 YY1P25490 414 aa25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 SPP2Q13103 211 aa25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 IKQ13123 557 aaPredicted RBP25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 TTLL12Q14166 644 aaPredicted RBP25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 FAM83BQ5T0W9 1011 aa25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 BTNL9Q6UXG8 535 aa25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 ZNF526Q8TF50 670 aaPredicted RBP25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 LPAR1Q92633 364 aa25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 GPKOWQ92917 476 aaPredicted RBP eCLIP25.64■■□□□ 1.69
SEMA3F-207ENST00000450338 GOLGA6L22H0YM25 854 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms