RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 COL11A1P12107 1806 aaPredicted RBP16.38■□□□□ 0.21
TOM1-211ENST00000449508 MX1P20591 662 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 TMEM132BQ14DG7 1078 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 FAM83BQ5T0W9 1011 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 ANKRD45Q5TZF3 282 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 PRO3102Q9H379 93 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 ZNF287Q9HBT7 754 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 EPB41L4AQ9HCS5 686 aaPredicted RBP16.37■□□□□ 0.21
TOM1-211ENST00000449508 NYAP2Q9P242 653 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 STAP2Q9UGK3 403 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 ADAMTS5Q9UNA0 930 aa16.37■□□□□ 0.21
TOM1-211ENST00000449508 MSCO60682 206 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 COBLO75128 1261 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 PRDM1O75626 825 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 SLC25A27O95847 323 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 FCER1AP12319 257 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 OLFML2BQ68BL8 750 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 CLIP2Q9UDT6 1046 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 DDX20Q9UHI6 824 aaKnown RBP16.36■□□□□ 0.21
TOM1-211ENST00000449508 ZMYND8Q9ULU4 1186 aaPredicted RBP16.36■□□□□ 0.21
TOM1-211ENST00000449508 PFASO15067 1338 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
TOM1-211ENST00000449508 FRMPD3Q5JV73 1810 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
TOM1-211ENST00000449508 MYH4Q9Y623 1939 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 F5H6K3 240 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 VWA5AO00534 786 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 COL6A1P12109 1028 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 STAT3P40763 770 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 KLRC3Q07444 240 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 ZMYM1Q5SVZ6 1142 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 ABRAQ8N0Z2 381 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 TRPV1Q8NER1 839 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
TOM1-211ENST00000449508 PPP1R9AQ9ULJ8 1098 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 ZNF236Q9UL36 1845 aa16.35■□□□□ 0.21
TOM1-211ENST00000449508 RANBP2P49792 3224 aaKnown RBP16.35■□□□□ 0.21
TOM1-211ENST00000449508 IGHA2P01877 340 aa16.34■□□□□ 0.21
TOM1-211ENST00000449508 CYBAP13498 195 aa16.34■□□□□ 0.21
TOM1-211ENST00000449508 SYN1P17600 705 aa16.34■□□□□ 0.21
TOM1-211ENST00000449508 RIOX2Q8IUF8 465 aa16.34■□□□□ 0.21
TOM1-211ENST00000449508 NUP88Q99567 741 aaPredicted RBP16.34■□□□□ 0.21
TOM1-211ENST00000449508 NAPBQ9H115 298 aa16.34■□□□□ 0.21
TOM1-211ENST00000449508 SLC3A2P08195 630 aaKnown RBP16.33■□□□□ 0.2
TOM1-211ENST00000449508 PDE4BQ07343 736 aa16.33■□□□□ 0.2
TOM1-211ENST00000449508 MAML3Q96JK9 1138 aa16.33■□□□□ 0.2
TOM1-211ENST00000449508 MMP19Q99542 508 aa16.33■□□□□ 0.2
TOM1-211ENST00000449508 SLF1Q9BQI6 1058 aa16.33■□□□□ 0.2
TOM1-211ENST00000449508 SENP6Q9GZR1 1112 aaPredicted RBP16.33■□□□□ 0.2
TOM1-211ENST00000449508 IGKV6D-41A0A0C4DH26 115 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 NDUFB10O96000 172 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 TSPY3P0CV98 308 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 TSPY8P0CW00 308 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 PPARAQ07869 468 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 KCTD2Q14681 263 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 LRRC26Q2I0M4 334 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 ANO1Q5XXA6 986 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 PRPF38AQ8NAV1 312 aaKnown RBP16.32■□□□□ 0.2
TOM1-211ENST00000449508 REPS2Q8NFH8 660 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 MKL1Q969V6 931 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 CEP95Q96GE4 821 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 GDF15Q99988 308 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 SALL3Q9BXA9 1300 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 MTMR4Q9NYA4 1195 aa16.32■□□□□ 0.2
TOM1-211ENST00000449508 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
TOM1-211ENST00000449508 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 SEPT4O43236 478 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 TTLL1O95922 423 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 PGK2P07205 417 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 COPB2P35606 906 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 SLC4A3P48751 1232 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 HDAC1Q13547 482 aaPredicted RBP16.31■□□□□ 0.2
TOM1-211ENST00000449508 FAM47AQ5JRC9 791 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 CCDC129Q6ZRS4 1044 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 ARRDC4Q8NCT1 418 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 NEDD1Q8NHV4 660 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 CTDP1Q9Y5B0 961 aaPredicted RBP16.31■□□□□ 0.2
TOM1-211ENST00000449508 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
TOM1-211ENST00000449508 DNM1LO00429 736 aa16.3■□□□□ 0.2
TOM1-211ENST00000449508 ZBED4O75132 1171 aa16.3■□□□□ 0.2
TOM1-211ENST00000449508 BMP8BP34820 402 aa16.3■□□□□ 0.2
TOM1-211ENST00000449508 PDE1AP54750 535 aa16.3■□□□□ 0.2
TOM1-211ENST00000449508 TFAP4Q01664 338 aa16.3■□□□□ 0.2
TOM1-211ENST00000449508 GJC2Q5T442 439 aaPredicted RBP16.3■□□□□ 0.2
TOM1-211ENST00000449508 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
TOM1-211ENST00000449508 EVI5LQ96CN4 794 aa16.3■□□□□ 0.2
TOM1-211ENST00000449508 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
TOM1-211ENST00000449508 MAGEA10P43363 369 aaPredicted RBP16.29■□□□□ 0.2
TOM1-211ENST00000449508 ATN1P54259 1190 aaPredicted RBP16.29■□□□□ 0.2
TOM1-211ENST00000449508 ZNF792Q3KQV3 632 aa16.29■□□□□ 0.2
TOM1-211ENST00000449508 CPXCR1Q8N123 301 aa16.29■□□□□ 0.2
TOM1-211ENST00000449508 LRRC47Q8N1G4 583 aaKnown RBP16.29■□□□□ 0.2
TOM1-211ENST00000449508 KIFC2Q96AC6 838 aa16.29■□□□□ 0.2
TOM1-211ENST00000449508 TINF2Q9BSI4 451 aa16.29■□□□□ 0.2
TOM1-211ENST00000449508 TEX13BQ9BXU2 312 aa16.29■□□□□ 0.2
TOM1-211ENST00000449508 SYNPO2Q9UMS6 1093 aa16.29■□□□□ 0.2
TOM1-211ENST00000449508 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms