RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 LRRC2Q9BYS8 371 aa12.5□□□□□ -0.41
SMPD4-211ENST00000449159 ZFYVE28Q9HCC9 887 aa12.5□□□□□ -0.41
SMPD4-211ENST00000449159 FBXO28Q9NVF7 368 aa12.5□□□□□ -0.41
SMPD4-211ENST00000449159 CPA4Q9UI42 421 aa12.5□□□□□ -0.41
SMPD4-211ENST00000449159 PNMA3Q9UL41 463 aa12.5□□□□□ -0.41
SMPD4-211ENST00000449159 SYNPO2Q9UMS6 1093 aa12.5□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L15C9J2P7 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L13C9JLJ4 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L11C9JVI0 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L18D6R9N7 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L22D6RA61 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L17D6RBQ6 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L19D6RCP7 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L20D6RJB6 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 IFIT3O14879 490 aaKnown RBP12.49□□□□□ -0.41
SMPD4-211ENST00000449159 TLR2O60603 784 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 MCCP23508 829 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 MCM5P33992 734 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 USP17L24Q0WX57 530 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 PABPC4Q13310 644 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMPD4-211ENST00000449159 PPP4R3BQ5MIZ7 849 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 DGKHQ86XP1 1220 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 SMCR8Q8TEV9 937 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-211ENST00000449159 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 JAKMIP1Q96N16 626 aaKnown RBP12.49□□□□□ -0.41
SMPD4-211ENST00000449159 TTC14Q96N46 770 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 NEK1Q96PY6 1258 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 TRIM17Q9Y577 477 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 DOCK3Q8IZD9 2030 aa12.49□□□□□ -0.41
SMPD4-211ENST00000449159 SPDYE16A6NNV3 312 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-211ENST00000449159 FLOT1O75955 427 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 OSBPP22059 807 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 HERVK_113P62684 666 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 KRT32Q14532 448 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 TMEM67Q5HYA8 995 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 IFIT1BQ5T764 474 aaKnown RBP12.48□□□□□ -0.41
SMPD4-211ENST00000449159 SAMD1Q6SPF0 538 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-211ENST00000449159 C17orf99Q6UX52 265 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 KCTD1Q719H9 257 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 OTOP1Q7RTM1 612 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 PNMA1Q8ND90 353 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 IGDCC4Q8TDY8 1250 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 ERO1AQ96HE7 468 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 LY9Q9HBG7 655 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
SMPD4-211ENST00000449159 MYH6P13533 1939 aa12.48□□□□□ -0.41
SMPD4-211ENST00000449159 KIAA0100Q14667 2235 aaKnown RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 SMCHD1A6NHR9 2005 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 FRMPD2Q68DX3 1309 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 ECM2O94769 699 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 PDHBP11177 359 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 BCRP11274 1271 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 BMP3P12645 472 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 SLC1A4P43007 532 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 CAP1Q01518 475 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 WTAPQ15007 396 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 SART3Q15020 963 aaKnown RBP12.47□□□□□ -0.41
SMPD4-211ENST00000449159 CCDC178Q5BJE1 867 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 ATG4CQ96DT6 458 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 GMCL1Q96IK5 515 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 KAT14Q9H8E8 782 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
SMPD4-211ENST00000449159 ERICH2A1L162 156 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 TMEM232C9JQI7 657 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 CNMDO75829 334 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 SNHG28P0DPA3 235 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 COG2Q14746 738 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 CCDC96Q2M329 555 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 DHX32Q7L7V1 743 aaKnown RBP12.46□□□□□ -0.41
SMPD4-211ENST00000449159 DCAF4Q8WV16 495 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 PAGR1Q9BTK6 254 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 GPCPD1Q9NPB8 672 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 RBPJLQ9UBG7 517 aa12.46□□□□□ -0.41
SMPD4-211ENST00000449159 WDR19Q8NEZ3 1342 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 GOLGA8HP0CJ92 632 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 RPS6KB1P23443 525 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 DSG3P32926 999 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 BLOC1S2Q6QNY1 142 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 LBX2Q6XYB7 198 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 CD99L2Q8TCZ2 262 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 KIFC2Q96AC6 838 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 MYL10Q9BUA6 226 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
SMPD4-211ENST00000449159 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 CPVLQ9H3G5 476 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 BTBD7Q9P203 1132 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 PPP1R9AQ9ULJ8 1098 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 PLXNB2O15031 1838 aa12.45□□□□□ -0.42
SMPD4-211ENST00000449159 POTEFA5A3E0 1075 aa12.44□□□□□ -0.42
SMPD4-211ENST00000449159 EIF5BO60841 1220 aaKnown RBP12.44□□□□□ -0.42
SMPD4-211ENST00000449159 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms