RNA–Protein interactions for RNA: ENST00000448732.1

R3HDM2-208, Transcript of R3H domain containing 2, human

TSL 1 (best)

Gene R3HDM2, Length 195 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
R3HDM2-208	ENST00000448732	MKNK2	Q9HBH9	465 aa		27.83	■■■□□ 2.05
R3HDM2-208	ENST00000448732	FBXO28	Q9NVF7	368 aa		27.83	■■■□□ 2.05
R3HDM2-208	ENST00000448732	TTC41P	Q6P2S7	1318 aa		27.83	■■■□□ 2.05
R3HDM2-208	ENST00000448732	SZT2	Q5T011	3432 aa		27.83	■■■□□ 2.05
R3HDM2-208	ENST00000448732	MINDY4B	A8MYZ0	360 aa		27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	GPAA1	O43292	621 aa		27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	FCER1A	P12319	257 aa		27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	SAMD1	Q6SPF0	538 aa	Predicted RBP	27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	NYAP2	Q9P242	653 aa		27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	PPP1R9A	Q9ULJ8	1098 aa		27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	ROBO3	Q96MS0	1386 aa		27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	GREB1L	Q9C091	1923 aa	Predicted RBP	27.82	■■■□□ 2.04
R3HDM2-208	ENST00000448732	VWA5A	O00534	786 aa		27.81	■■■□□ 2.04
R3HDM2-208	ENST00000448732	MAGEA10	P43363	369 aa	Predicted RBP	27.81	■■■□□ 2.04
R3HDM2-208	ENST00000448732	LRRFIP1	Q32MZ4	808 aa	Known RBP	27.81	■■■□□ 2.04
R3HDM2-208	ENST00000448732	SENP6	Q9GZR1	1112 aa	Predicted RBP	27.81	■■■□□ 2.04
R3HDM2-208	ENST00000448732	ZNFX1	Q9P2E3	1918 aa	Known RBP	27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	PATL2	C9JE40	543 aa	Known RBP	27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	DNM1L	O00429	736 aa		27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	SOX1	O00570	391 aa	Predicted RBP	27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	FAM83B	Q5T0W9	1011 aa		27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	RIOX2	Q8IUF8	465 aa		27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	MAML3	Q96JK9	1138 aa		27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732	COL11A1	P12107	1806 aa	Predicted RBP	27.8	■■■□□ 2.04
R3HDM2-208	ENST00000448732		M0R2C6	588 aa		27.79	■■■□□ 2.04
R3HDM2-208	ENST00000448732	ERC2	O15083	957 aa		27.79	■■■□□ 2.04
R3HDM2-208	ENST00000448732	STAT3	P40763	770 aa		27.79	■■■□□ 2.04
R3HDM2-208	ENST00000448732	STK11IP	Q8N1F8	1099 aa		27.79	■■■□□ 2.04
R3HDM2-208	ENST00000448732	PI4K2B	Q8TCG2	481 aa		27.79	■■■□□ 2.04
R3HDM2-208	ENST00000448732	SEPT4	O43236	478 aa		27.78	■■■□□ 2.04
R3HDM2-208	ENST00000448732	RAD21	O60216	631 aa		27.78	■■■□□ 2.04
R3HDM2-208	ENST00000448732	ARRDC4	Q8NCT1	418 aa		27.78	■■■□□ 2.04
R3HDM2-208	ENST00000448732	REPS2	Q8NFH8	660 aa		27.78	■■■□□ 2.04
R3HDM2-208	ENST00000448732	ZNF214	Q9UL59	606 aa	Predicted RBP	27.78	■■■□□ 2.04
R3HDM2-208	ENST00000448732	IGKV6D-41	A0A0C4DH26	115 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732		F5H6K3	240 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	APP	P05067	770 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	TDO2	P48775	406 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	KLRC3	Q07444	240 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	IFNL3	Q8IZI9	196 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	MMP19	Q99542	508 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	ZNF287	Q9HBT7	754 aa		27.77	■■■□□ 2.04
R3HDM2-208	ENST00000448732	COPB2	P35606	906 aa		27.76	■■■□□ 2.03
R3HDM2-208	ENST00000448732	PRAMEF19	Q5SWL8	479 aa		27.76	■■■□□ 2.03
R3HDM2-208	ENST00000448732	ZNF444	Q8N0Y2	327 aa	Predicted RBP	27.76	■■■□□ 2.03
R3HDM2-208	ENST00000448732	LRCH3	Q96II8	777 aa		27.76	■■■□□ 2.03
R3HDM2-208	ENST00000448732	CLIP2	Q9UDT6	1046 aa		27.76	■■■□□ 2.03
R3HDM2-208	ENST00000448732	DIS3	Q9Y2L1	958 aa	Known RBP	27.76	■■■□□ 2.03
R3HDM2-208	ENST00000448732	GJC2	Q5T442	439 aa	Predicted RBP	27.75	■■■□□ 2.03
R3HDM2-208	ENST00000448732	OTUD7A	Q8TE49	926 aa	Predicted RBP	27.75	■■■□□ 2.03
R3HDM2-208	ENST00000448732	MKL1	Q969V6	931 aa		27.75	■■■□□ 2.03
R3HDM2-208	ENST00000448732	SLF1	Q9BQI6	1058 aa		27.75	■■■□□ 2.03
R3HDM2-208	ENST00000448732	NDUFB10	O96000	172 aa		27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	KCTD2	Q14681	263 aa		27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	ZNF792	Q3KQV3	632 aa		27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	TDH	Q8IZJ6	230 aa		27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	SEC62	Q99442	399 aa	Known RBP	27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	NUP88	Q99567	741 aa	Predicted RBP	27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	UBE2O	Q9C0C9	1292 aa	Known RBP	27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	NRBP1	Q9UHY1	535 aa		27.74	■■■□□ 2.03
R3HDM2-208	ENST00000448732	LRIT3	Q3SXY7	679 aa		27.73	■■■□□ 2.03
R3HDM2-208	ENST00000448732	ANO1	Q5XXA6	986 aa		27.73	■■■□□ 2.03
R3HDM2-208	ENST00000448732	PRPF38A	Q8NAV1	312 aa	Known RBP	27.73	■■■□□ 2.03
R3HDM2-208	ENST00000448732	NACAP1	Q9BZK3	213 aa		27.73	■■■□□ 2.03
R3HDM2-208	ENST00000448732	SYNPO2	Q9UMS6	1093 aa		27.73	■■■□□ 2.03
R3HDM2-208	ENST00000448732	PRDM1	O75626	825 aa		27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	PGK2	P07205	417 aa		27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	ATN1	P54259	1190 aa	Predicted RBP	27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	ZMYM1	Q5SVZ6	1142 aa		27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	GPR153	Q6NV75	609 aa		27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	FSD1	Q9BTV5	496 aa		27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	MTMR4	Q9NYA4	1195 aa		27.72	■■■□□ 2.03
R3HDM2-208	ENST00000448732	DNAH12	Q6ZR08	3092 aa		27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	KBTBD13	C9JR72	458 aa		27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	MX1	P20591	662 aa		27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	RRP1	P56182	461 aa	Known RBP	27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	CEP95	Q96GE4	821 aa		27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	TINF2	Q9BSI4	451 aa		27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	TEX13B	Q9BXU2	312 aa		27.71	■■■□□ 2.03
R3HDM2-208	ENST00000448732	SLC39A5	Q6ZMH5	540 aa		27.7	■■■□□ 2.02
R3HDM2-208	ENST00000448732	NEDD1	Q8NHV4	660 aa		27.7	■■■□□ 2.02
R3HDM2-208	ENST00000448732	SALL3	Q9BXA9	1300 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	LAMA3	Q16787	3333 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	MYH4	Q9Y623	1939 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	SMCHD1	A6NHR9	2005 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	ATP2A1	O14983	1001 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	TTLL1	O95922	423 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	RTP1	P59025	263 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	MDM2	Q00987	491 aa	Predicted RBP	27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	PDE4B	Q07343	736 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	LRRC41	Q15345	812 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	NAPB	Q9H115	298 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	PLXNA1	Q9UIW2	1896 aa		27.69	■■■□□ 2.02
R3HDM2-208	ENST00000448732	SLC3A2	P08195	630 aa	Known RBP	27.68	■■■□□ 2.02
R3HDM2-208	ENST00000448732	SNRNP48	Q6IEG0	339 aa	Known RBP	27.68	■■■□□ 2.02
R3HDM2-208	ENST00000448732	GMCL1P1	Q8NEA9	526 aa		27.68	■■■□□ 2.02
R3HDM2-208	ENST00000448732	FEM1B	Q9UK73	627 aa		27.68	■■■□□ 2.02
R3HDM2-208	ENST00000448732	RIPK3	Q9Y572	518 aa		27.68	■■■□□ 2.02
R3HDM2-208	ENST00000448732	ZBED4	O75132	1171 aa		27.67	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms