RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ERICH2A1L162 156 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 SPDYE16A6NNV3 312 aaPredicted RBP16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 BMP3P12645 472 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 ZKSCAN1P17029 563 aaPredicted RBP16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 DSG3P32926 999 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 NOVP48745 357 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 SART3Q15020 963 aaKnown RBP16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 NECTIN1Q15223 517 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 TMEM47Q9BQJ4 181 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 MORF4L1Q9UBU8 362 aa16.48■□□□□ 0.23
GTF3C3-206ENST00000448539 TNRC18O15417 2968 aaPredicted RBP16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 MYPNQ86TC9 1320 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 GNRH1P01148 92 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 MCCP23508 829 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 ERVK-9P63128 1117 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 ERVK-24P63145 666 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 CCNA1P78396 465 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 IKQ13123 557 aaPredicted RBP16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 MB21D1Q8N884 522 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 CHMP4CQ96CF2 233 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 ARHGAP39Q9C0H5 1083 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 KAT14Q9H8E8 782 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 CWC22Q9HCG8 908 aaKnown RBP16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 RBPJLQ9UBG7 517 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
GTF3C3-206ENST00000448539 TNKSO95271 1327 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 TNPO2O14787 897 aaKnown RBP16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 SOX10P56693 466 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 IFIT1BQ5T764 474 aaKnown RBP16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 STOX1Q6ZVD7 989 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 CYB5R4Q7L1T6 521 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 OTOP1Q7RTM1 612 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 NKX2-3Q8TAU0 364 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 DCAF4Q8WV16 495 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 ATG4CQ96DT6 458 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 SLF1Q9BQI6 1058 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 TAF6LQ9Y6J9 622 aa16.46■□□□□ 0.23
GTF3C3-206ENST00000448539 TMEM232C9JQI7 657 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 IFIT3O14879 490 aaKnown RBP16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 KRT32Q14532 448 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 RCSD1Q6JBY9 416 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 ENAHQ8N8S7 591 aaPredicted RBP16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 PRPF38AQ8NAV1 312 aaKnown RBP16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 CHURC1Q8WUH1 139 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 KIFC2Q96AC6 838 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 COA7Q96BR5 231 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 FBXO28Q9NVF7 368 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
GTF3C3-206ENST00000448539 PEX10O60683 326 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 MAPK4P31152 587 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 STAT2P52630 851 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 PRMT2P55345 433 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 PLS1Q14651 629 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 Q3C1V9 767 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 WDR78Q5VTH9 848 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 FBXO46Q6PJ61 603 aaPredicted RBP16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 FAM160B2Q86V87 743 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 PNMA1Q8ND90 353 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 ANKS1AQ92625 1134 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 TRIM47Q96LD4 638 aa16.44■□□□□ 0.22
GTF3C3-206ENST00000448539 VWA5AO00534 786 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 EPB41L2O43491 1005 aaKnown RBP16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 ZBED4O75132 1171 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 CNMDO75829 334 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 MCM5P33992 734 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 WTAPQ15007 396 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 KCTD1Q719H9 257 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 CHST3Q7LGC8 479 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 MB21D2Q8IYB1 491 aaPredicted RBP16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 PTPN22Q9Y2R2 807 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 GTF3C3Q9Y5Q9 886 aa16.43■□□□□ 0.22
GTF3C3-206ENST00000448539 PRC1O43663 620 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 FDX1P10109 184 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 PDHBP11177 359 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 CTGFP29279 349 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 HSPA4P34932 840 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 CAP1Q01518 475 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 TSGA10IPQ3SY00 556 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 TMEM67Q5HYA8 995 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 POTEEQ6S8J3 1075 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 RAET1EQ8TD07 263 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 NEK1Q96PY6 1258 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 SPATC1LQ9H0A9 340 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 ADAMTS5Q9UNA0 930 aa16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 FRMPD2Q68DX3 1309 aaPredicted RBP16.42■□□□□ 0.22
GTF3C3-206ENST00000448539 PLA2G6O60733 806 aa16.41■□□□□ 0.22
GTF3C3-206ENST00000448539 PRKCZQ05513 592 aa16.41■□□□□ 0.22
GTF3C3-206ENST00000448539 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms