RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	ZNF790	Q6PG37	636 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	CAPN12	Q6ZSI9	719 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	DTX1	Q86Y01	620 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	TRIM42	Q8IWZ5	723 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	INTS4	Q96HW7	963 aa	Known RBP	4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	DBNDD2	Q9BQY9	259 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	IL1RAPL2	Q9NP60	686 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	DIAPH3	Q9NSV4	1193 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	ECHDC1	Q9NTX5	307 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	CXXC1	Q9P0U4	656 aa	Predicted RBP	4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	UTY	O14607	1347 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	RAD50	Q92878	1312 aa		4.87	□□□□□ -1.63
PTPN12-208	ENST00000447995	SIPA1L3	O60292	1781 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	HMX2	A2RU54	273 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	DDX3Y	O15523	660 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	SGSM2	O43147	1006 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	CYP2E1	P05181	493 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	PDIA4	P13667	645 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	SSFA2	P28290	1259 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	HSPA4	P34932	840 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	GRIK1	P39086	918 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	ZAP70	P43403	619 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	CUL4A	Q13619	759 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	ELOA	Q14241	798 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	KLHL40	Q2TBA0	621 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	CCDC82	Q8N4S0	544 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	KLHL23	Q8NBE8	558 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	PI4K2B	Q8TCG2	481 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	PIK3R5	Q8WYR1	880 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	ANP32B	Q92688	251 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	EVI5L	Q96CN4	794 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	SPACA7	Q96KW9	195 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	MKNK1	Q9BUB5	465 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	PBX4	Q9BYU1	374 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	FAM13B	Q9NYF5	915 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	BRPF3	Q9ULD4	1205 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	SPATA31A3	Q5VYP0	1347 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	COL15A1	P39059	1388 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	KDM6A	O15550	1401 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	RGPD2	P0DJD1	1756 aa		4.86	□□□□□ -1.63
PTPN12-208	ENST00000447995	ERVV-2	B6SEH9	535 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	MBD3	O95983	291 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	ANXA1	P04083	346 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PTPRA	P18433	802 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	NCL	P19338	710 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	CDC25B	P30305	580 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PREP	P48147	710 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	CABP4	P57796	275 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	GCKR	Q14397	625 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	DUOXA2	Q1HG44	320 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PROSER3	Q2NL68	480 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	TSHZ3	Q63HK5	1081 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	INTS5	Q6P9B9	1019 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	TICAM2	Q86XR7	235 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	FAM20C	Q8IXL6	584 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	FAM43A	Q8N2R8	423 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	CEP120	Q8N960	986 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	SHKBP1	Q8TBC3	707 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	GPR152	Q8TDT2	470 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	XAGE3	Q8WTP9	111 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	TMX3	Q96JJ7	454 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	METTL22	Q9BUU2	404 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	ADAM19	Q9H013	955 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	GZF1	Q9H116	711 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	SH2B1	Q9NRF2	756 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	ABI2	Q9NYB9	513 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	DDX49	Q9Y6V7	483 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PCDH11X	Q9BZA7	1347 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PCDH11Y	Q9BZA8	1340 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	MEGF6	O75095	1541 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PKD1L3	Q7Z443	1732 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	PARP4	Q9UKK3	1724 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	SCN11A	Q9UI33	1791 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	TUBGCP6	Q96RT7	1819 aa		4.85	□□□□□ -1.63
PTPN12-208	ENST00000447995	COL18A1	P39060	1754 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	CRYBG1	Q9Y4K1	1723 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	RFX7	Q2KHR2	1363 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	WDR17	Q8IZU2	1322 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	WDR33	Q9C0J8	1336 aa	Known RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995		H3BRJ5	948 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	ACPP	P15309	386 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	ZKSCAN1	P17029	563 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	SCNN1A	P37088	669 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	AIMP1	Q12904	312 aa	Known RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	CWF19L2	Q2TBE0	894 aa	Known RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	TTC39B	Q5VTQ0	682 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	FAM117B	Q6P1L5	589 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	COPS6	Q7L5N1	327 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	AACS	Q86V21	672 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	UNC5CL	Q8IV45	518 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	PLBD2	Q8NHP8	589 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	SYAP1	Q96A49	352 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	KLHDC7B	Q96G42	594 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	SUCLG2	Q96I99	432 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	ZNF496	Q96IT1	587 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	ZSCAN31	Q96LW9	406 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	MYD88	Q99836	296 aa		4.84	□□□□□ -1.63
PTPN12-208	ENST00000447995	FAM83C	Q9BQN1	747 aa		4.84	□□□□□ -1.63

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