RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 BLIDQ8IZY5 108 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 TBC1D22AQ8WUA7 517 aa18.55■□□□□ 0.56
OTUB1-204ENST00000447683 ANKRD31Q8N7Z5 1873 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 SERPINC1P01008 464 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 KCNJ6P48051 423 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 RHBDL3P58872 404 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 SLC35G1Q2M3R5 365 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 CT47A1Q5JQC4 288 aaPredicted RBP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 TMEM47Q9BQJ4 181 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 SAP30BPQ9UHR5 308 aaKnown RBP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 FAM205AQ6ZU69 1335 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 PALM3A6NDB9 673 aaPredicted RBP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 USP27XA6NNY8 438 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 ZNF18P17022 549 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 SFPQP23246 707 aaKnown RBP eCLIP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 FMR1Q06787 632 aaKnown RBP eCLIP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 MFSD14BQ5SR56 506 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 NYAP1Q6ZVC0 841 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 TMC4Q7Z404 712 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 SLF2Q8IX21 1173 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 TEX11Q8IYF3 940 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 PAGE5Q96GU1 130 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 QTRT2Q9H974 415 aaKnown RBP18.54■□□□□ 0.56
OTUB1-204ENST00000447683 PCDHA4Q9UN74 947 aa18.54■□□□□ 0.56
OTUB1-204ENST00000447683 M0R2N6 131 aa18.53■□□□□ 0.56
OTUB1-204ENST00000447683 CHRM1P11229 460 aaPredicted RBP18.53■□□□□ 0.56
OTUB1-204ENST00000447683 ERCC5P28715 1186 aaPredicted RBP18.53■□□□□ 0.56
OTUB1-204ENST00000447683 CDK8P49336 464 aa18.53■□□□□ 0.56
OTUB1-204ENST00000447683 FAM177A1Q8N128 213 aaPredicted RBP18.53■□□□□ 0.56
OTUB1-204ENST00000447683 FLT1P17948 1338 aa18.53■□□□□ 0.56
OTUB1-204ENST00000447683 VWA3AA6NCI4 1184 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 CYTH3O43739 400 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 ZNF827Q17R98 1081 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 ARL6IP4Q66PJ3 421 aaKnown RBP18.52■□□□□ 0.56
OTUB1-204ENST00000447683 PAXIP1Q6ZW49 1069 aaPredicted RBP18.52■□□□□ 0.56
OTUB1-204ENST00000447683 VSTM4Q8IW00 320 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 DAGLBQ8NCG7 672 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 NEDD1Q8NHV4 660 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 MED15Q96RN5 788 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 DPYDQ12882 1025 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 CFAP100Q494V2 611 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 SP8Q8IXZ3 490 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 C4orf32Q8N8J7 132 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 GPKOWQ92917 476 aaPredicted RBP eCLIP18.52■□□□□ 0.56
OTUB1-204ENST00000447683 LZTS2Q9BRK4 669 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 NFE2L3Q9Y4A8 694 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 PAXBP1Q9Y5B6 917 aa18.52■□□□□ 0.56
OTUB1-204ENST00000447683 E2F4Q16254 413 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 GALNT17Q6IS24 598 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 TYW1BQ6NUM6 668 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 GSDMAQ96QA5 445 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 IL17AQ16552 155 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 EYA3Q99504 573 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 PYM1Q9BRP8 204 aaKnown RBP18.51■□□□□ 0.55
OTUB1-204ENST00000447683 INTS13Q9NVM9 706 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 NRXN2Q9P2S2 1712 aa18.51■□□□□ 0.55
OTUB1-204ENST00000447683 CTIFO43310 598 aaKnown RBP18.5■□□□□ 0.55
OTUB1-204ENST00000447683 TRIM37O94972 964 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 MCM7P33993 719 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 AFMP43652 599 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 NOVP48745 357 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 WWC2Q6AWC2 1192 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 KRT27Q7Z3Y8 459 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 CCDC148Q8NFR7 591 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 STX8Q9UNK0 236 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 C6orf229H3BNL8 230 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
OTUB1-204ENST00000447683 SLC20A2Q08357 652 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 PTPN14Q15678 1187 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 CEP135Q66GS9 1140 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 E4F1Q66K89 784 aaPredicted RBP18.5■□□□□ 0.55
OTUB1-204ENST00000447683 PROM2Q8N271 834 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 SPZ1Q9BXG8 430 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 BARHL2Q9NY43 387 aa18.5■□□□□ 0.55
OTUB1-204ENST00000447683 PSDA5PKW4 1024 aaPredicted RBP18.49■□□□□ 0.55
OTUB1-204ENST00000447683 TMEM232C9JQI7 657 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 STXBP3O00186 592 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
OTUB1-204ENST00000447683 NRDCO43847 1150 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 IQUBQ8NA54 791 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 TMX1Q9H3N1 280 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 LONP1P36776 959 aaKnown RBP18.49■□□□□ 0.55
OTUB1-204ENST00000447683 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 TRMT44Q8IYL2 757 aaKnown RBP18.49■□□□□ 0.55
OTUB1-204ENST00000447683 TSC1Q92574 1164 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 PCDHA6Q9UN73 950 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 SUGT1Q9Y2Z0 365 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 PCDHA8Q9Y5H6 950 aa18.49■□□□□ 0.55
OTUB1-204ENST00000447683 KLRF2D3W0D1 207 aa18.48■□□□□ 0.55
OTUB1-204ENST00000447683 TOP1P11387 765 aaKnown RBP18.48■□□□□ 0.55
OTUB1-204ENST00000447683 CUL4BQ13620 913 aa18.48■□□□□ 0.55
OTUB1-204ENST00000447683 PDXDC2PQ6P474 469 aa18.48■□□□□ 0.55
OTUB1-204ENST00000447683 CCDC112Q8NEF3 446 aa18.48■□□□□ 0.55
OTUB1-204ENST00000447683 COA1Q9GZY4 146 aa18.48■□□□□ 0.55
OTUB1-204ENST00000447683 TRMT1Q9NXH9 659 aaKnown RBP18.48■□□□□ 0.55
OTUB1-204ENST00000447683 ATP6V0A2Q9Y487 856 aa18.48■□□□□ 0.55
OTUB1-204ENST00000447683 DAGLAQ9Y4D2 1042 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms