RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 PPP1R13LQ8WUF5 828 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 BTN2A2Q8WVV5 523 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 ASPSCR1Q9BZE9 553 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 LRRC4BQ9NT99 713 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 EMC9Q9Y3B6 208 aa8.5□□□□□ -1.05
COL11A1-205ENST00000447608 LOC102724159A0A0B4J2E5 919 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 SHOXO15266 292 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 DLX3O60479 287 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 WISP1O95388 367 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
COL11A1-205ENST00000447608 ZNF460Q14592 562 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 PWP2Q15269 919 aaKnown RBP8.49□□□□□ -1.05
COL11A1-205ENST00000447608 LRRC41Q15345 812 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 SF1Q15637 639 aaKnown RBP8.49□□□□□ -1.05
COL11A1-205ENST00000447608 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 PKN3Q6P5Z2 889 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 TRIM59Q8IWR1 403 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 C7orf61Q8IZ16 206 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 WDR66Q8TBY9 1149 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 FOXQ1Q9C009 403 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 MTFR1LQ9H019 292 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 GP6Q9HCN6 339 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 SSU72Q9NP77 194 aaKnown RBP8.49□□□□□ -1.05
COL11A1-205ENST00000447608 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
COL11A1-205ENST00000447608 PHLDB1Q86UU1 1377 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-205ENST00000447608 MEGF11A6BM72 1044 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 TSPAN6O43657 245 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 OPA1O60313 960 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 RASGRP1O95267 797 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 ADH5P11766 374 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 DRD2P14416 443 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 POU3F2P20265 443 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-205ENST00000447608 GABREP78334 506 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 SRSF11Q05519 484 aaKnown RBP8.48□□□□□ -1.05
COL11A1-205ENST00000447608 MCL1Q07820 350 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 PPP2R5AQ15172 486 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 DYMQ7RTS9 669 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 GSTCDQ8NEC7 633 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 BRF1Q92994 677 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 SCLYQ96I15 445 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
COL11A1-205ENST00000447608 SLC5A4Q9NY91 659 aa8.48□□□□□ -1.05
COL11A1-205ENST00000447608 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
COL11A1-205ENST00000447608 KPNA6O60684 536 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 EIF5BO60841 1220 aaKnown RBP8.47□□□□□ -1.05
COL11A1-205ENST00000447608 KCNH1O95259 989 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 ASLP04424 464 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 ITGA4P13612 1032 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 SOX4Q06945 474 aaPredicted RBP8.47□□□□□ -1.05
COL11A1-205ENST00000447608 MTMR1Q13613 665 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 SEPT7Q16181 437 aaKnown RBP8.47□□□□□ -1.05
COL11A1-205ENST00000447608 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
COL11A1-205ENST00000447608 ARHGEF39Q8N4T4 335 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 VWCEQ96DN2 955 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 PIDD1Q9HB75 910 aa8.47□□□□□ -1.05
COL11A1-205ENST00000447608 COL17A1Q9UMD9 1497 aaPredicted RBP8.46□□□□□ -1.05
COL11A1-205ENST00000447608 SHTN1A0MZ66 631 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 SHISA8B8ZZ34 492 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 EFCAB14O75071 495 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 NPTXRO95502 500 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 ASPAP45381 313 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 STAT4Q14765 748 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 DHCR24Q15392 516 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 NTRK3Q16288 839 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 GTF2IRD2BQ6EKJ0 949 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 POMZP3Q6PJE2 187 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 KIAA1211Q6ZU35 1233 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 ARMCX6Q7L4S7 300 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 GTF2IRD2Q86UP8 949 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.46□□□□□ -1.06
COL11A1-205ENST00000447608 DTWD1Q8N5C7 304 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 SMG8Q8ND04 991 aaKnown RBP8.46□□□□□ -1.06
COL11A1-205ENST00000447608 KREMEN1Q96MU8 473 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 CCDC8Q9H0W5 538 aaPredicted RBP8.46□□□□□ -1.06
COL11A1-205ENST00000447608 MYH16Q9H6N6 1097 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 CYP4F12Q9HCS2 524 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 CGGBP1Q9UFW8 167 aaPredicted RBP8.46□□□□□ -1.06
COL11A1-205ENST00000447608 CEP131Q9UPN4 1083 aa8.46□□□□□ -1.06
COL11A1-205ENST00000447608 GPR39O43194 453 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 JMJD7P0C870 316 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 AMPD1P23109 780 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 KCNJ6P48051 423 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 ZNF445P59923 1031 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 ITKQ08881 620 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 PPP2R5DQ14738 602 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 RNF219Q5W0B1 726 aaPredicted RBP8.45□□□□□ -1.06
COL11A1-205ENST00000447608 NECAB2Q7Z6G3 386 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 FBXO11Q86XK2 927 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
COL11A1-205ENST00000447608 CRACR2BQ8N4Y2 399 aaPredicted RBP8.45□□□□□ -1.06
COL11A1-205ENST00000447608 DNAJB8Q8NHS0 232 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 DCAF11Q8TEB1 546 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 KCTD13Q8WZ19 329 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 PMM1Q92871 262 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 PTPRN2Q92932 1015 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 MTMR8Q96EF0 704 aa8.45□□□□□ -1.06
COL11A1-205ENST00000447608 SMAD5Q99717 465 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms