RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 FLOT1O75955 427 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 GOLGA8HP0CJ92 632 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 PDHBP11177 359 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 HOXA7P31268 230 aaPredicted RBP15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 NT5C2P49902 561 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 USP17L24Q0WX57 530 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 PPP4R3BQ5MIZ7 849 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 OTUD7BQ6GQQ9 843 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 TTBK2Q6IQ55 1244 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 BLOC1S2Q6QNY1 142 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 DHX32Q7L7V1 743 aaKnown RBP15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 TTC14Q96N46 770 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 PARK7Q99497 189 aaKnown RBP15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 BEGAINQ9BUH8 593 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 CPVLQ9H3G5 476 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 GPCPD1Q9NPB8 672 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 SLC45A1Q9Y2W3 748 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 SMCHD1A6NHR9 2005 aa15.56■□□□□ 0.08
HLA-DOB-207ENST00000447394 SPDYE16A6NNV3 312 aaPredicted RBP15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 BMP3P12645 472 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 RXRAP19793 462 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 OSBPP22059 807 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 SLC1A4P43007 532 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 HERVK_113P62684 666 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 SART3Q15020 963 aaKnown RBP15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 CCDC178Q5BJE1 867 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 Q6ZUG5 572 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 SMCR8Q8TEV9 937 aaPredicted RBP15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 ATG4CQ96DT6 458 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 GMCL1Q96IK5 515 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 C22orf23Q9BZE7 217 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 ZSWIM6Q9HCJ5 1215 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 TXNRD2Q9NNW7 524 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 ZCCHC17Q9NP64 241 aaKnown RBP15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 SAGE1Q9NXZ1 904 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 BRPF3Q9ULD4 1205 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 SYNPO2Q9UMS6 1093 aa15.55■□□□□ 0.08
HLA-DOB-207ENST00000447394 PLXNB2O15031 1838 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 WDR19Q8NEZ3 1342 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 TMEM232C9JQI7 657 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 ALDH1A1P00352 501 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 HSPA8P11142 646 aaKnown RBP15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 SLC16A2P36021 539 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 SNAP25P60880 206 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 CAP1Q01518 475 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 NFXL1Q6ZNB6 911 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 RUFY3Q7L099 469 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 DCAF4Q8WV16 495 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 TMEM87BQ96K49 555 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 KIF2CQ99661 725 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 LARP6Q9BRS8 491 aaKnown RBP15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 PAGR1Q9BTK6 254 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 ZFYVE28Q9HCC9 887 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 PNMA3Q9UL41 463 aa15.54■□□□□ 0.08
HLA-DOB-207ENST00000447394 BAZ2BQ9UIF8 2168 aaKnown RBP15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 TLR2O60603 784 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 CNMDO75829 334 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 SNHG28P0DPA3 235 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 TAL1P17542 331 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 PSMA5P28066 241 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 ANAPC15P60006 121 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 ZNF543Q08ER8 600 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 APOBRQ0VD83 1088 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 IKQ13123 557 aaPredicted RBP15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 CCDC144CPQ8IYA2 1237 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 ZNF654Q8IZM8 581 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 STAG2Q8N3U4 1231 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 ANKRD13CQ8N6S4 541 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 BRF1Q92994 677 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 KIFC2Q96AC6 838 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 BTBD7Q9P203 1132 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 CYP46A1Q9Y6A2 500 aa15.53■□□□□ 0.08
HLA-DOB-207ENST00000447394 DOCK3Q8IZD9 2030 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 CCDC69A6NI79 296 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 HMGB1P09429 215 aaKnown RBP15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 BCRP11274 1271 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 DSG3P32926 999 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 C17orf99Q6UX52 265 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 NUP133Q8WUM0 1156 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 IL17RAQ96F46 866 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 CFHR5Q9BXR6 569 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 TM6SF1Q9BZW5 370 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 RBPJLQ9UBG7 517 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 PPP1R9AQ9ULJ8 1098 aa15.52■□□□□ 0.08
HLA-DOB-207ENST00000447394 KLF18A0A0U1RQI7 1052 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 GPR25O00155 361 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 LIFRP42702 1097 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 RBM25P49756 843 aaKnown RBP15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 LBX1P52954 281 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 FGD1P98174 961 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 TROAPQ12815 778 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 COG2Q14746 738 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 GRM4Q14833 912 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 SLC35G1Q2M3R5 365 aa15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 NOL8Q76FK4 1167 aaKnown RBP15.51■□□□□ 0.07
HLA-DOB-207ENST00000447394 MICU3Q86XE3 530 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms