RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 BABAM1Q9NWV8 329 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 UGGT2Q9NYU1 1516 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 MAGI1Q96QZ7 1491 aaPredicted RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 ANKRD13CQ8N6S4 541 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 TMEM87BQ96K49 555 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 MEFVO15553 781 aaPredicted RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 NBPF10Q6P3W6 841 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 LRRN4CLQ8ND94 238 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 PBKQ96KB5 322 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 ATP6V1G3Q96LB4 118 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 RAB17Q9H0T7 212 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 PAGE5Q96GU1 130 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 INTS9Q9NV88 658 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 DNM2P50570 870 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 IFIT1BQ5T764 474 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 KIAA0232Q92628 1395 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 E7EWF7 191 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 ATP5HO75947 161 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 SEL1L2Q5TEA6 688 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 TUBB6Q9BUF5 446 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 NOVA2Q9UNW9 492 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 KLHL29Q96CT2 875 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 PHF23Q9BUL5 403 aaPredicted RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 MKNK2Q9HBH9 465 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 EXOC5O00471 708 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 IGHMBP2P38935 993 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 IKQ13123 557 aaPredicted RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 OSBPL9Q96SU4 736 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 ATP6V0A4Q9HBG4 840 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 SAMSN1Q9NSI8 373 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 RSRC2Q7L4I2 434 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 RUBCNQ92622 972 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 FAM210AQ96ND0 272 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 NBPF3Q9H094 633 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 CXCR5P32302 372 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 GBP7Q8N8V2 638 aaPredicted RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 EIF4A3P38919 411 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 CFAP157Q5JU67 520 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 GRAMD1CQ8IYS0 662 aa8.68□□□□□ -1.02
SMG1-202ENST00000446231 SREK1Q8WXA9 508 aaKnown RBP8.68□□□□□ -1.02
SMG1-202ENST00000446231 NOS1P29475 1434 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 PPP4R3AQ6IN85 833 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 SASH3O75995 380 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 SYCP3Q8IZU3 236 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 SMC1BQ8NDV3 1235 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 SV2BQ7L1I2 683 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 PPP1R9AQ9ULJ8 1098 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 TRIM37O94972 964 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 FAM167BQ9BTA0 163 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 SNRPA1P09661 255 aaKnown RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 MIER3Q7Z3K6 550 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 LRRC8CQ8TDW0 803 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 DYDC2Q96IM9 177 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 IL9RQ01113 521 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 RESP18Q5W5W9 173 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 ANGPTL2Q9UKU9 493 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 CD2APQ9Y5K6 639 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 LMNAP02545 664 aaKnown RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 EEF1GP26641 437 aaKnown RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 EAF2Q96CJ1 260 aaPredicted RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 VAT1LQ9HCJ6 419 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 SEMA3EO15041 775 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 CCDC93Q567U6 631 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 RWDD2AQ9UIY3 292 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 TMED1Q13445 227 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 DHTKD1Q96HY7 919 aaPredicted RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 NDUFA10O95299 355 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 MAGOHP61326 146 aaKnown RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 C6orf118Q5T5N4 469 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 MAGOHBQ96A72 148 aaKnown RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 PARP2Q9UGN5 583 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 KIF23Q02241 960 aaPredicted RBP8.67□□□□□ -1.02
SMG1-202ENST00000446231 KLHL30Q0D2K2 578 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 TBC1D22AQ8WUA7 517 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMG1-202ENST00000446231 TXNDC9O14530 226 aa8.67□□□□□ -1.02
SMG1-202ENST00000446231 IDI1Q13907 227 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CYFIP2Q96F07 1278 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 GSDMAQ96QA5 445 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 RASGRF2O14827 1237 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CFAP61Q8NHU2 1237 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 ZMYM6O95789 1325 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 SWT1Q5T5J6 900 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 PIK3AP1Q6ZUJ8 805 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CHMP6Q96FZ7 201 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 PARP1P09874 1014 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 DDX23Q9BUQ8 820 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 ZNF287Q9HBT7 754 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 ATP2A2P16615 1042 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 KRT79Q5XKE5 535 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 CTDP1Q9Y5B0 961 aaPredicted RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 MAP3K5Q99683 1374 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 LGALS16A8MUM7 142 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 RPL13P26373 211 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 IFNAR2P48551 515 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 ZC3H18Q86VM9 953 aaKnown RBP8.66□□□□□ -1.02
SMG1-202ENST00000446231 MIS12Q9H081 205 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 GNA14O95837 355 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 PPP1R2P41236 205 aa8.66□□□□□ -1.02
SMG1-202ENST00000446231 APBB1IPQ7Z5R6 666 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms