RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 ZC3H4Q9UPT8 1303 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 MMP1P03956 469 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 ASNSP08243 561 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 MAP3K10Q02779 954 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 ZNF543Q08ER8 600 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 PFKFB3Q16875 520 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 GPATCH4Q5T3I0 446 aaKnown RBP10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 NBPF12Q5TAG4 269 aaPredicted RBP10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 DCAF15Q66K64 600 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 CPVLQ9H3G5 476 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 GPCPD1Q9NPB8 672 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 LMBRD1Q9NUN5 540 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 CFAP45Q9UL16 551 aa10.97□□□□□ -0.65
SMPD4P1-203ENST00000443839 CYTH3O43739 400 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 SLC1A4P43007 532 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 SLFN13Q68D06 897 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 USP48Q86UV5 1035 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 SIAH1Q8IUQ4 282 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 DIS3L2Q8IYB7 885 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 RRP36Q96EU6 259 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 SCAND2PQ9GZW5 306 aaPredicted RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 UBA5Q9GZZ9 404 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 VAT1LQ9HCJ6 419 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 TFIP11Q9UBB9 837 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 SEC63Q9UGP8 760 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 PPP2R3BQ9Y5P8 575 aa10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 DDX49Q9Y6V7 483 aaKnown RBP10.96□□□□□ -0.65
SMPD4P1-203ENST00000443839 KIF28PB7ZC32 967 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 SMARCA1P28370 1054 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 CEBPZQ03701 1054 aaKnown RBP10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 SLC35G1Q2M3R5 365 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 PRAMEF18Q5VWM3 479 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 KCTD1Q719H9 257 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 HOMER1Q86YM7 354 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 TMEM87AQ8NBN3 555 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 GMCL1P1Q8NEA9 526 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 DCAF4Q8WV16 495 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 ZNF396Q96N95 335 aaPredicted RBP10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 BRMS1Q9HCU9 246 aa10.96□□□□□ -0.66
SMPD4P1-203ENST00000443839 POLR2AP24928 1970 aaKnown RBP10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 PITPNM2Q9BZ72 1349 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 MYH15Q9Y2K3 1946 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 F5H6K3 240 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 SOCS7O14512 581 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 KLRC3Q07444 240 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 ATL3Q6DD88 541 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 HEATR3Q7Z4Q2 680 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 SULF1Q8IWU6 871 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 SPATA32Q96LK8 384 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 SH2D4AQ9H788 454 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 SYNPO2Q9UMS6 1093 aa10.95□□□□□ -0.66
SMPD4P1-203ENST00000443839 A0A1W2PRG0 241 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 GLTPD2A6NH11 291 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 BTBD18B2RXH4 712 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 NDUFB10O96000 172 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 U2AF2P26368 475 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 ECE1P42892 770 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 NLRP5P59047 1200 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 NOSTRINQ8IVI9 506 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 PHF20Q9BVI0 1012 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 ZNF341Q9BYN7 854 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 FOXP1Q9H334 677 aaPredicted RBP10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 GOPCQ9HD26 462 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 CTNND1O60716 968 aaKnown RBP10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 EPHX2P34913 555 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 KRT2P35908 639 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 SLC16A2P36021 539 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 IKQ13123 557 aaPredicted RBP10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 SUPT20HL1Q3ZLR7 823 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 TTBK2Q6IQ55 1244 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 SPICE1Q8N0Z3 855 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 CCDC148Q8NFR7 591 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 ACER1Q8TDN7 264 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 LEO1Q8WVC0 666 aaPredicted RBP10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 USP28Q96RU2 1077 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 PIGSQ96S52 555 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 FEZ1Q99689 392 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 RIOX1Q9H6W3 641 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 ATAD5Q96QE3 1844 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 ELP1O95163 1332 aa10.94□□□□□ -0.66
SMPD4P1-203ENST00000443839 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 MBD3O95983 291 aa10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 VEGFAP15692 232 aaPredicted RBP10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 CALML3P27482 149 aa10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 PLCB2Q00722 1185 aa10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 NR5A1Q13285 461 aa10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 KLHL40Q2TBA0 621 aa10.93□□□□□ -0.66
SMPD4P1-203ENST00000443839 WWC2Q6AWC2 1192 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms