RNA–Protein interactions for RNA: ENST00000442653.1

TOP3B-209, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-209ENST00000442653 TMEM132BQ14DG7 1078 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 C12orf60Q5U649 245 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 NCAPG2Q86XI2 1143 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 RPAP2Q8IXW5 612 aaPredicted RBP10.06□□□□□ -0.8
TOP3B-209ENST00000442653 MB21D1Q8N884 522 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 HAUS7Q99871 368 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
TOP3B-209ENST00000442653 MROH8Q9H579 483 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 ARHGEF10LQ9HCE6 1279 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 ATP8A2Q9NTI2 1148 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 FBXO28Q9NVF7 368 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
TOP3B-209ENST00000442653 COL11A1P12107 1806 aaPredicted RBP10.05□□□□□ -0.8
TOP3B-209ENST00000442653 TTC28Q96AY4 2481 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 WDR46O15213 610 aaKnown RBP10.05□□□□□ -0.8
TOP3B-209ENST00000442653 PGK2P07205 417 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 EEF2P13639 858 aaKnown RBP10.05□□□□□ -0.8
TOP3B-209ENST00000442653 SNX17Q15036 470 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 TRIM60Q495X7 471 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 FAM47AQ5JRC9 791 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 C16orf86Q6ZW13 317 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 ABRAQ8N0Z2 381 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 ARRDC4Q8NCT1 418 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 MAML3Q96JK9 1138 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 GUCD1Q96NT3 240 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.05□□□□□ -0.8
TOP3B-209ENST00000442653 SH2D4AQ9H788 454 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 ADAMTS5Q9UNA0 930 aa10.05□□□□□ -0.8
TOP3B-209ENST00000442653 MYH7P12883 1935 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 KBTBD13C9JR72 458 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 RAB11FIP3O75154 756 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 MS4A1P11836 297 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 FCER1AP12319 257 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 ADCYAP1R1P41586 468 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 LRRC41Q15345 812 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 UBE3CQ15386 1083 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 C9orf50Q5SZB4 431 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 SLC39A5Q6ZMH5 540 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 SH3RF1Q7Z6J0 888 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 FERMT2Q96AC1 680 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 CCDC17Q96LX7 622 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.04□□□□□ -0.86e-11■■■□□ 16.9
TOP3B-209ENST00000442653 PUS7LQ9H0K6 701 aaKnown RBP10.04□□□□□ -0.8
TOP3B-209ENST00000442653 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
TOP3B-209ENST00000442653 DDX19BQ9UMR2 479 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 SLC4A4Q9Y6R1 1079 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 SMCHD1A6NHR9 2005 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 MUC3AQ02505 3323 aa10.04□□□□□ -0.8
TOP3B-209ENST00000442653 VWA5AO00534 786 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 SMARCA5O60264 1052 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 TAL1P17542 331 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 SHHQ15465 462 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 FAM83BQ5T0W9 1011 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 FAM109BQ6ICB4 259 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 RIOX2Q8IUF8 465 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 REPS2Q8NFH8 660 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 BADQ92934 168 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 LENG1Q96BZ8 264 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 FAM161BQ96MY7 647 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 PDLIM7Q9NR12 457 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 SLC5A4Q9NY91 659 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 PRKAG2Q9UGJ0 569 aa10.03□□□□□ -0.8
TOP3B-209ENST00000442653 ZNF214Q9UL59 606 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 GREB1LQ9C091 1923 aaPredicted RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 ZNFX1Q9P2E3 1918 aaKnown RBP10.03□□□□□ -0.8
TOP3B-209ENST00000442653 CHD7Q9P2D1 2997 aa10.02□□□□□ -0.8
TOP3B-209ENST00000442653 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 SLC25A27O95847 323 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 PGK1P00558 417 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 ITGB8P26012 769 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 STAT3P40763 770 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 TLE2Q04725 743 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 ZNF792Q3KQV3 632 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 C20orf194Q5TEA3 1177 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 AMOTL1Q8IY63 956 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 TRIM43Q96BQ3 446 aaPredicted RBP10.02□□□□□ -0.81
TOP3B-209ENST00000442653 STRBPQ96SI9 672 aaKnown RBP10.02□□□□□ -0.81
TOP3B-209ENST00000442653 MMP19Q99542 508 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.81
TOP3B-209ENST00000442653 TINF2Q9BSI4 451 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 XPNPEP3Q9NQH7 507 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 PPP1R9AQ9ULJ8 1098 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 PHF24Q9UPV7 400 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 PLXNA1Q9UIW2 1896 aa10.02□□□□□ -0.81
TOP3B-209ENST00000442653 ROBO3Q96MS0 1386 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 RAD21O60216 631 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 ZNF865P0CJ78 1059 aaPredicted RBP10.01□□□□□ -0.81
TOP3B-209ENST00000442653 RARBP10826 455 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 RASA1P20936 1047 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 KCTD2Q14681 263 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 C1orf53Q5VUE5 145 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 TSHZ3Q63HK5 1081 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 DIEXFQ68CQ4 756 aaKnown RBP10.01□□□□□ -0.81
TOP3B-209ENST00000442653 STK11IPQ8N1F8 1099 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 DDRGK1Q96HY6 314 aa10.01□□□□□ -0.81
TOP3B-209ENST00000442653 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms