RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 ZMYM6O95789 1325 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 PCP11498 1178 aaKnown RBP13.26□□□□□ -0.29
NELFE-205ENST00000441998 ERCC3P19447 782 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 MFAP1P55081 439 aaKnown RBP13.26□□□□□ -0.29
NELFE-205ENST00000441998 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 CACNB2Q08289 660 aaPredicted RBP13.26□□□□□ -0.29
NELFE-205ENST00000441998 MCMDC2Q4G0Z9 681 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 DPP9Q86TI2 863 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 RIOX2Q8IUF8 465 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 PRPF38AQ8NAV1 312 aaKnown RBP13.26□□□□□ -0.29
NELFE-205ENST00000441998 DPF3Q92784 378 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 PLIN4Q96Q06 1357 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 SEC62Q99442 399 aaKnown RBP13.26□□□□□ -0.29
NELFE-205ENST00000441998 NBPF3Q9H094 633 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
NELFE-205ENST00000441998 DIS3Q9Y2L1 958 aaKnown RBP13.26□□□□□ -0.29
NELFE-205ENST00000441998 NAV1Q8NEY1 1877 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 TSPY3P0CV98 308 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 TSPY8P0CW00 308 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 FCER1AP12319 257 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 STAT3P40763 770 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 WDR78Q5VTH9 848 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 CLEC10AQ8IUN9 316 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 EXOC6Q8TAG9 804 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 SLF1Q9BQI6 1058 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 CLIP2Q9UDT6 1046 aa13.25□□□□□ -0.29
NELFE-205ENST00000441998 HIP1O00291 1037 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 ORC4O43929 436 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 PLA2G6O60733 806 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 NDUFB10O96000 172 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 ADORA2AP29274 412 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 NOVP48745 357 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 OAZ1P54368 228 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 TRIM32Q13049 653 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 TMEM132BQ14DG7 1078 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 LHX8Q68G74 356 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
NELFE-205ENST00000441998 MSL3Q8N5Y2 521 aaKnown RBP13.24□□□□□ -0.29
NELFE-205ENST00000441998 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 PAWRQ96IZ0 340 aaKnown RBP13.24□□□□□ -0.29
NELFE-205ENST00000441998 LNPKQ9C0E8 428 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 FEM1BQ9UK73 627 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 ZNF214Q9UL59 606 aaPredicted RBP13.24□□□□□ -0.29
NELFE-205ENST00000441998 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
NELFE-205ENST00000441998 MGAMO43451 1857 aa13.24□□□□□ -0.29
NELFE-205ENST00000441998 H0YGN5 161 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 FOXP2O15409 715 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 ZBED4O75132 1171 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 IGHDP01880 384 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 TFAP4Q01664 338 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 PLS1Q14651 629 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 KCTD2Q14681 263 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 CCL14Q16627 93 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 FAM83BQ5T0W9 1011 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 GMCL1Q96IK5 515 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
NELFE-205ENST00000441998 EVI5O60447 810 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 PRDM1O75626 825 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 FGAP02671 866 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 MNX1P50219 401 aaPredicted RBP13.22□□□□□ -0.29
NELFE-205ENST00000441998 HABP4Q5JVS0 413 aaKnown RBP13.22□□□□□ -0.29
NELFE-205ENST00000441998 RCSD1Q6JBY9 416 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 CHURC1Q8WUH1 139 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 C11orf49Q9H6J7 331 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 TCP11L1Q9NUJ3 509 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 FLRT1Q9NZU1 646 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 FBXO40Q9UH90 709 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 DDX20Q9UHI6 824 aaKnown RBP13.22□□□□□ -0.29
NELFE-205ENST00000441998 DOCK3Q8IZD9 2030 aa13.22□□□□□ -0.29
NELFE-205ENST00000441998 A0A1W2PPC1 479 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 COBLO75128 1261 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
NELFE-205ENST00000441998 COL6A1P12109 1028 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 BMP3P12645 472 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 CYBAP13498 195 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 SDSP20132 328 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 CCND3P30281 292 aaPredicted RBP13.21□□□□□ -0.29
NELFE-205ENST00000441998 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 SLC38A10Q9HBR0 1119 aa13.21□□□□□ -0.29
NELFE-205ENST00000441998 CEP290O15078 2479 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 TSPY2A6NKD2 308 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 SEPT4O43236 478 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 RAD21O60216 631 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 SLFN13Q68D06 897 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 B4GALNT3Q6L9W6 998 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 CCDC129Q6ZRS4 1044 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 ARRDC4Q8NCT1 418 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 CHST13Q8NET6 341 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
NELFE-205ENST00000441998 TTC14Q96N46 770 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms