RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 CD2APQ9Y5K6 639 aa8.02□□□□□ -1.13
CHD6-204ENST00000440647 LOC100289279A0A1B0GTE1 492 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 TMEM238LA0A1B0GVL6 79 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 PHKG2P15735 406 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 YBX3P16989 372 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHD6-204ENST00000440647 GRM2Q14416 872 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 ENOX2Q16206 610 aaKnown RBP8.01□□□□□ -1.13
CHD6-204ENST00000440647 GLIS3Q8NEA6 775 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 USP26Q9BXU7 913 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 PPP4R2Q9NY27 417 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 RAXQ9Y2V3 346 aa8.01□□□□□ -1.13
CHD6-204ENST00000440647 PLEKHG2Q9H7P9 1386 aa8□□□□□ -1.13
CHD6-204ENST00000440647 PNMA6FA0A0J9YX94 578 aa8□□□□□ -1.13
CHD6-204ENST00000440647 DHX15O43143 795 aaKnown RBP8□□□□□ -1.13
CHD6-204ENST00000440647 SART1O43290 800 aaKnown RBP8□□□□□ -1.13
CHD6-204ENST00000440647 B3GALT4O96024 378 aa8□□□□□ -1.13
CHD6-204ENST00000440647 HSP90AB1P08238 724 aaKnown RBP8□□□□□ -1.13
CHD6-204ENST00000440647 EIF4A2Q14240 407 aaKnown RBP8□□□□□ -1.13
CHD6-204ENST00000440647 EXOSC6Q5RKV6 272 aaKnown RBP8□□□□□ -1.13
CHD6-204ENST00000440647 TMPRSS13Q9BYE2 586 aa8□□□□□ -1.13
CHD6-204ENST00000440647 NRSN2Q9GZP1 204 aa8□□□□□ -1.13
CHD6-204ENST00000440647 UTRNP46939 3433 aa8□□□□□ -1.13
CHD6-204ENST00000440647 ZNF831Q5JPB2 1677 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 DLGAP3O95886 979 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 CYP11A1P05108 521 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 COL5A3P25940 1745 aaPredicted RBP7.99□□□□□ -1.13
CHD6-204ENST00000440647 RPS26P11Q5JNZ5 115 aaPredicted RBP7.99□□□□□ -1.13
CHD6-204ENST00000440647 FDX2Q6P4F2 183 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 AEBP1Q8IUX7 1158 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 LINC00116Q8NCU8 138 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 RGS22Q8NE09 1264 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 UTP4Q969X6 686 aaKnown RBP7.99□□□□□ -1.13
CHD6-204ENST00000440647 SUGCTQ9HAC7 445 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 CYP4F12Q9HCS2 524 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 ASAP1Q9ULH1 1129 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 IGSF1Q8N6C5 1336 aa7.99□□□□□ -1.13
CHD6-204ENST00000440647 ATP10DQ9P241 1426 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 HSPA5P11021 654 aaKnown RBP7.98□□□□□ -1.13
CHD6-204ENST00000440647 PREPP48147 710 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 FMR1Q06787 632 aaKnown RBP eCLIP7.98□□□□□ -1.13
CHD6-204ENST00000440647 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.98□□□□□ -1.13
CHD6-204ENST00000440647 PLEKHO1Q53GL0 409 aaPredicted RBP7.98□□□□□ -1.13
CHD6-204ENST00000440647 C1orf141Q5JVX7 400 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 PI16Q6UXB8 463 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 SMIM5Q71RC9 77 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 SMG8Q8ND04 991 aaKnown RBP7.98□□□□□ -1.13
CHD6-204ENST00000440647 MYRFLQ96LU7 910 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 BCO2Q9BYV7 579 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 ZFYVE1Q9HBF4 777 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 WWC3Q9ULE0 1092 aa7.98□□□□□ -1.13
CHD6-204ENST00000440647 N4BP2Q86UW6 1770 aaPredicted RBP7.97□□□□□ -1.13
CHD6-204ENST00000440647 CICQ96RK0 1608 aaPredicted RBP7.97□□□□□ -1.13
CHD6-204ENST00000440647 KIF13BQ9NQT8 1826 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 ERVV-2B6SEH9 535 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 MAPK8P45983 427 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 ITPK1Q13572 414 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 POU4F3Q15319 338 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 AMOTQ4VCS5 1084 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 ZNF530Q6P9A1 599 aaPredicted RBP7.97□□□□□ -1.13
CHD6-204ENST00000440647 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.97□□□□□ -1.13
CHD6-204ENST00000440647 MORC1Q86VD1 984 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 AMIGO3Q86WK7 504 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 C12orf50Q8NA57 414 aaPredicted RBP7.97□□□□□ -1.13
CHD6-204ENST00000440647 PANK3Q9H999 370 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 ATG3Q9NT62 314 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 KNSTRNQ9Y448 316 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 C4AP0C0L4 1744 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 KDRP35968 1356 aa7.97□□□□□ -1.13
CHD6-204ENST00000440647 IGLV1-40P01703 118 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 MMP10P09238 476 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 MAOBP27338 520 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 FCGRTP55899 365 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 DTHD1Q6ZMT9 781 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 FAM20CQ8IXL6 584 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 FBF1Q8TES7 1133 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 ZNF526Q8TF50 670 aaPredicted RBP7.96□□□□□ -1.14
CHD6-204ENST00000440647 TRIM56Q9BRZ2 755 aaKnown RBP7.96□□□□□ -1.14
CHD6-204ENST00000440647 HIF3AQ9Y2N7 669 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 SCN11AQ9UI33 1791 aa7.96□□□□□ -1.14
CHD6-204ENST00000440647 VIRMAQ69YN4 1812 aaKnown RBP7.96□□□□□ -1.14
CHD6-204ENST00000440647 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
CHD6-204ENST00000440647 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
CHD6-204ENST00000440647 COBLO75128 1261 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 TIAF1O95411 115 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 BMP3P12645 472 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 XRCC5P13010 732 aaKnown RBP7.95□□□□□ -1.14
CHD6-204ENST00000440647 RFC4P35249 363 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 GRIK1P39086 918 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 MTHFSP49914 203 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 HP1BP3Q5SSJ5 553 aaPredicted RBP7.95□□□□□ -1.14
CHD6-204ENST00000440647 NXPE4Q6UWF7 544 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 CLEC10AQ8IUN9 316 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 NLGN1Q8N2Q7 840 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 TJP1Q07157 1748 aa7.95□□□□□ -1.14
CHD6-204ENST00000440647 GAS2O43903 313 aaKnown RBP7.94□□□□□ -1.14
CHD6-204ENST00000440647 CTSBP07858 339 aa7.94□□□□□ -1.14
CHD6-204ENST00000440647 SSTR4P31391 388 aa7.94□□□□□ -1.14
CHD6-204ENST00000440647 FAAP100Q0VG06 881 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms