RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZKSCAN5Q9Y2L8 839 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 BAZ2BQ9UIF8 2168 aaKnown RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ZMYM6O95789 1325 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 TSPY2A6NKD2 308 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ZBTB22O15209 634 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 FKTNO75072 461 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 OFD1O75665 1012 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 TSPY3P0CV98 308 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 TSPY8P0CW00 308 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 GJB2P29033 226 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 UBE3CQ15386 1083 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 FKBP1CQ5VVH2 108 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 RBM43Q6ZSC3 357 aaKnown RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 PIAS4Q8N2W9 510 aaPredicted RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 NKX2-3Q8TAU0 364 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 ABHD8Q96I13 439 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 P2RX7Q99572 595 aaKnown RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 DDX19AQ9NUU7 478 aaKnown RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 NAP1L2Q9ULW6 460 aaPredicted RBP5.52□□□□□ -1.53
EDEM3-203ENST00000439962 AFG3L2Q9Y4W6 797 aa5.52□□□□□ -1.53
EDEM3-203ENST00000439962 CA12O43570 354 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 IGSF3O75054 1194 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 FLOT1O75955 427 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 FGAP02671 866 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 EEF2P13639 858 aaKnown RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 CYP2B6P20813 491 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 TFAP4Q01664 338 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 PPIL2Q13356 520 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 DHX8Q14562 1220 aaKnown RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 MAP3K11Q16584 847 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 KIAA1755Q5JYT7 1200 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 SMARCC2Q8TAQ2 1214 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 HHIPL1Q96JK4 782 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 TCEANC2Q96MN5 208 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 NACAP1Q9BZK3 213 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 CTNNA3Q9UI47 895 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 HERC5Q9UII4 1024 aaKnown RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 MYO9BQ13459 2157 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 ZNF646O15015 1829 aaPredicted RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 CTAGE5O15320 804 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 CTGFP29279 349 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 TM4SF4P48230 202 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 BACE1P56817 501 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 Q3C1V9 767 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 ZMYM1Q5SVZ6 1142 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 C12orf60Q5U649 245 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 KCTD1Q719H9 257 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 FOXP4Q8IVH2 680 aaPredicted RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 GTF3C6Q969F1 213 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 KIFC2Q96AC6 838 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 ZNF274Q96GC6 653 aaPredicted RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 NEK1Q96PY6 1258 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 FUCA2Q9BTY2 467 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 LRRC2Q9BYS8 371 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 ASCC2Q9H1I8 757 aaPredicted RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 RPAP3Q9H6T3 665 aaPredicted RBP5.51□□□□□ -1.53
EDEM3-203ENST00000439962 TXNRD2Q9NNW7 524 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 CFAP45Q9UL16 551 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 TAF6LQ9Y6J9 622 aa5.51□□□□□ -1.53
EDEM3-203ENST00000439962 PDS5AQ29RF7 1337 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 TNPO2O14787 897 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 DHX16O60231 1041 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 TLR2O60603 784 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PFKFB2O60825 505 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 GOLGA8HP0CJ92 632 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 HSPD1P10809 573 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 SLC16A2P36021 539 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PRKCZQ05513 592 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PPARAQ07869 468 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 ME3Q16798 604 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 SLC9C1Q4G0N8 1177 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 FAM83BQ5T0W9 1011 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 OTOP1Q7RTM1 612 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 CCDC82Q8N4S0 544 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 RAET1EQ8TD07 263 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 CEP95Q96GE4 821 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 VAT1LQ9HCJ6 419 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 EMILIN3Q9NT22 766 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 GABRQQ9UN88 632 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PTCH2Q9Y6C5 1203 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PAPPA2Q9BXP8 1791 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 MUC3AQ02505 3323 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 FRMPD2Q68DX3 1309 aaPredicted RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 SYCE3A1L190 88 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PATL2C9JE40 543 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PRKCSHP14314 528 aaPredicted RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 VCAM1P19320 739 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 MMP14P50281 582 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 TOB2Q14106 344 aaPredicted RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 KIF22Q14807 665 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 MTFR1Q15390 333 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 GPAT2Q6NUI2 795 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 MTERF4Q7Z6M4 381 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 TRIM47Q96LD4 638 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 LARP6Q9BRS8 491 aaKnown RBP5.5□□□□□ -1.53
EDEM3-203ENST00000439962 MTA3Q9BTC8 594 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 PORCNQ9H237 461 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 ATP8A2Q9NTI2 1148 aa5.5□□□□□ -1.53
EDEM3-203ENST00000439962 TPCN1Q9ULQ1 816 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms