RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 OSBPL5Q9H0X9 879 aaPredicted RBP12.86□□□□□ -0.35
LMO3-207ENST00000439600 PI4KBQ9UBF8 816 aa12.86□□□□□ -0.35
LMO3-207ENST00000439600 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
LMO3-207ENST00000439600 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 USP17L12C9JPN9 530 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 USP17L21D6R901 530 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 PTH1RQ03431 593 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 KRT32Q14532 448 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 EML3Q32P44 896 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 SUPT20HL1Q3ZLR7 823 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 CTR9Q6PD62 1173 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 CDC37L1Q7L3B6 337 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 ZSCAN29Q8IWY8 852 aaPredicted RBP12.85□□□□□ -0.35
LMO3-207ENST00000439600 TRPM4Q8TD43 1214 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
LMO3-207ENST00000439600 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.85□□□□□ -0.35
LMO3-207ENST00000439600 PCDHAC2Q9Y5I4 1007 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 RBM8AQ9Y5S9 174 aaKnown RBP12.85□□□□□ -0.35
LMO3-207ENST00000439600 FLT1P17948 1338 aa12.85□□□□□ -0.35
LMO3-207ENST00000439600 FAM196BA6NMK8 535 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 EGFRP00533 1210 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 VARSP26640 1264 aaKnown RBP12.84□□□□□ -0.35
LMO3-207ENST00000439600 PDE4BQ07343 736 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 TCP10Q12799 353 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 RASA3Q14644 834 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 NECTIN1Q15223 517 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 C12orf60Q5U649 245 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 VPS53Q5VIR6 699 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 LDHDQ86WU2 507 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 IL25Q9H293 177 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 GGA3Q9NZ52 723 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 ANAPC4Q9UJX5 808 aa12.84□□□□□ -0.35
LMO3-207ENST00000439600 SBF1O95248 1867 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 WDR90Q96KV7 1748 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 PSMA5P28066 241 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 HSPA4P34932 840 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 NF2P35240 595 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 CACNB3P54284 484 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 ANAPC15P60006 121 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 PPARAQ07869 468 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 NFIAQ12857 509 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 TRDNQ13061 729 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 NCOA4Q13772 614 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 TRAF7Q6Q0C0 670 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 TRIM50Q86XT4 487 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 CRACR2BQ8N4Y2 399 aaPredicted RBP12.83□□□□□ -0.36
LMO3-207ENST00000439600 EHD4Q9H223 541 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 SWAP70Q9UH65 585 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 HERC5Q9UII4 1024 aaKnown RBP12.83□□□□□ -0.36
LMO3-207ENST00000439600 DICER1Q9UPY3 1922 aaKnown RBP12.83□□□□□ -0.36
LMO3-207ENST00000439600 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
LMO3-207ENST00000439600 ESPNB1AK53 854 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
LMO3-207ENST00000439600 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 MFSD6Q6ZSS7 791 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 CSRNP1Q96S65 589 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 C22orf23Q9BZE7 217 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 KRT23Q9C075 422 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 CNNM2Q9H8M5 875 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
LMO3-207ENST00000439600 SERPINB13Q9UIV8 391 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 PALD1Q9ULE6 856 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 DOLKQ9UPQ8 538 aa12.82□□□□□ -0.36
LMO3-207ENST00000439600 ATRNL1Q5VV63 1379 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 COL2A1P02458 1487 aaPredicted RBP12.81□□□□□ -0.36
LMO3-207ENST00000439600 SLC27A2O14975 620 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 FOXP2O15409 715 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
LMO3-207ENST00000439600 BRD1O95696 1058 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 CREB3L3Q68CJ9 461 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 PPP1R18Q6NYC8 613 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 ZNF444Q8N0Y2 327 aaPredicted RBP12.81□□□□□ -0.36
LMO3-207ENST00000439600 DEPDC4Q8N2C3 294 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 KCNB2Q92953 911 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 MKNK2Q9HBH9 465 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 EPB41L4AQ9HCS5 686 aaPredicted RBP12.81□□□□□ -0.36
LMO3-207ENST00000439600 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
LMO3-207ENST00000439600 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
LMO3-207ENST00000439600 PPP1R12BO60237 982 aaPredicted RBP12.8□□□□□ -0.36
LMO3-207ENST00000439600 CYP21A2P08686 494 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 PLCD1P51178 756 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 MAP3K10Q02779 954 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 METTL16Q86W50 562 aaKnown RBP12.8□□□□□ -0.36
LMO3-207ENST00000439600 ZFPM1Q8IX07 1006 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 STAG1Q8WVM7 1258 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 CCDC17Q96LX7 622 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 TMEM39BQ9GZU3 492 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 NOD1Q9Y239 953 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 MAP4K5Q9Y4K4 846 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 DOCK2Q92608 1830 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 CNTNAP1P78357 1384 aa12.8□□□□□ -0.36
LMO3-207ENST00000439600 TIAM2Q8IVF5 1701 aa12.79□□□□□ -0.36
LMO3-207ENST00000439600 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
LMO3-207ENST00000439600 PSME4Q14997 1843 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms