RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 BRWD1Q9NSI6 2320 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 UMODL1Q5DID0 1318 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 PI4K2BG5E9Z4 385 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 ZBTB22O15209 634 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 UBTFL1P0CB47 393 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-208ENST00000439029 ZNF865P0CJ78 1059 aaPredicted RBP11.97□□□□□ -0.49
SMPD4-208ENST00000439029 FCER1AP12319 257 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 AKR1A1P14550 325 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 MCAMP43121 646 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 KIAA1755Q5JYT7 1200 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 NUP133Q8WUM0 1156 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 ATG4CQ96DT6 458 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 TINF2Q9BSI4 451 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 HOXC10Q9NYD6 342 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 CHD7Q9P2D1 2997 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 REV3LO60673 3130 aa11.97□□□□□ -0.49
SMPD4-208ENST00000439029 XIRP2A4UGR9 3374 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 ZBBXA8MT70 800 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 GTPBP6O43824 516 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-208ENST00000439029 PLCG2P16885 1265 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 GUCY1A2P33402 732 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 CDK7P50613 346 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 CCL23P55773 120 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 NHLH1Q02575 133 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 SEPT2Q15019 361 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 CERKLQ49MI3 558 aaPredicted RBP11.96□□□□□ -0.49
SMPD4-208ENST00000439029 TATDN1Q6P1N9 297 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 GLT1D1Q96MS3 346 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 MMP19Q99542 508 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 TSEN34Q9BSV6 310 aaKnown RBP11.96□□□□□ -0.49
SMPD4-208ENST00000439029 MROH8Q9H579 483 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 COPRSQ9NQ92 184 aa11.96□□□□□ -0.49
SMPD4-208ENST00000439029 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 FLOT1O75955 427 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 PPP4CP60510 307 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 CCSAPQ6IQ19 270 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-208ENST00000439029 ATF7IPQ6VMQ6 1270 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 FAM126BQ8IXS8 530 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 SPICE1Q8N0Z3 855 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 HLA-CQ95604 372 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
SMPD4-208ENST00000439029 CABP5Q9NP86 173 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 ZHX1Q9UKY1 873 aaPredicted RBP11.95□□□□□ -0.5
SMPD4-208ENST00000439029 COG5Q9UP83 839 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 CNPY2Q9Y2B0 182 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 AKAP2Q9Y2D5 859 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
SMPD4-208ENST00000439029 PTPRCP08575 1304 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 PRR33A8MZF0 331 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 ARVCFO00192 962 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 MPHOSPH10O00566 681 aaKnown RBP11.94□□□□□ -0.5
SMPD4-208ENST00000439029 ASGR1P07306 291 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 CA3P07451 260 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 C6orf222P0C671 652 aaPredicted RBP11.94□□□□□ -0.5
SMPD4-208ENST00000439029 DSG3P32926 999 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 EVX2Q03828 476 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 ZNF792Q3KQV3 632 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 ABRAQ8N0Z2 381 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 MIGA1Q8NAN2 632 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 ARNTL2Q8WYA1 636 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 SSH1Q8WYL5 1049 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 ANKS1AQ92625 1134 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 FBXL18Q96ME1 805 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 NRBP1Q9UHY1 535 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 SERPINB13Q9UIV8 391 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 PCDHA11Q9Y5I1 949 aa11.94□□□□□ -0.5
SMPD4-208ENST00000439029 MROH7Q68CQ1 1323 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 A0A0U1RQG5 324 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-208ENST00000439029 TLR3O15455 904 aaKnown RBP11.93□□□□□ -0.5
SMPD4-208ENST00000439029 ARHGEF15O94989 841 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 ATP2A2P16615 1042 aaKnown RBP11.93□□□□□ -0.5
SMPD4-208ENST00000439029 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
SMPD4-208ENST00000439029 SHMT1P34896 483 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 USP5P45974 858 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 KCTD2Q14681 263 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 TMEM132BQ14DG7 1078 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 SPRED2Q7Z698 418 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 CLEC10AQ8IUN9 316 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 HIPK3Q9H422 1215 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 FAM184BQ9ULE4 1060 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 MYH1P12882 1939 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 FOCADQ5VW36 1801 aa11.93□□□□□ -0.5
SMPD4-208ENST00000439029 ELP1O95163 1332 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 ADCY6O43306 1168 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 SNAI1O95863 264 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-208ENST00000439029 CYP7A1P22680 504 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 SSTR3P32745 418 aaPredicted RBP11.92□□□□□ -0.5
SMPD4-208ENST00000439029 CSPP1Q1MSJ5 1256 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 MB21D1Q8N884 522 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 SCLYQ96I15 445 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 PHOX2BQ99453 314 aa11.92□□□□□ -0.5
SMPD4-208ENST00000439029 MYO5AQ9Y4I1 1855 aaKnown RBP11.91□□□□□ -0.5
SMPD4-208ENST00000439029 CD4P01730 458 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 PLCD1P51178 756 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 BEX3Q00994 111 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 TTLL4Q14679 1199 aa11.91□□□□□ -0.5
SMPD4-208ENST00000439029 TMEM67Q5HYA8 995 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms