RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
SGCE-205ENST00000437425 PCDHA4Q9UN74 947 aa17.63■□□□□ 0.41
SGCE-205ENST00000437425 DDTLA6NHG4 134 aaPredicted RBP17.62■□□□□ 0.41
SGCE-205ENST00000437425 MPHOSPH10O00566 681 aaKnown RBP17.62■□□□□ 0.41
SGCE-205ENST00000437425 GNA11P29992 359 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 NR5A1Q13285 461 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 SPDYE2Q495Y8 402 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 FAM83AQ86UY5 434 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 BLIDQ8IZY5 108 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 TNFRSF25Q93038 417 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 RIOX1Q9H6W3 641 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 CLIP2Q9UDT6 1046 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 TOB1P50616 345 aaPredicted RBP17.62■□□□□ 0.41
SGCE-205ENST00000437425 ZFPM1Q8IX07 1006 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 ELOA2Q8IYF1 753 aaPredicted RBP17.62■□□□□ 0.41
SGCE-205ENST00000437425 FERMT2Q96AC1 680 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 GOLPH3LQ9H4A5 285 aa17.62■□□□□ 0.41
SGCE-205ENST00000437425 ZNF70Q9UC06 446 aaPredicted RBP17.62■□□□□ 0.41
SGCE-205ENST00000437425 hCG_1642624A0A1W2PR95 340 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 ESYT2A0FGR8 921 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 CYTH3O43739 400 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 PTPREP23469 700 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 CACNB3P54284 484 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 CXCL9Q07325 125 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 NPY5RQ15761 445 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 RESP18Q5W5W9 173 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 SH3BP5LQ7L8J4 393 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 OXER1Q8TDS5 423 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 DCAF4Q8WV16 495 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 CCDC34Q96HJ3 373 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 CSRNP1Q96S65 589 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 FAM13BQ9NYF5 915 aa17.61■□□□□ 0.41
SGCE-205ENST00000437425 HOOK1Q9UJC3 728 aaKnown RBP17.61■□□□□ 0.41
SGCE-205ENST00000437425 SRPRBQ9Y5M8 271 aaKnown RBP17.61■□□□□ 0.41
SGCE-205ENST00000437425 TBC1D12O60347 775 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 MARCKSP29966 332 aaPredicted RBP17.6■□□□□ 0.41
SGCE-205ENST00000437425 TNNI2P48788 182 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 TYRO3Q06418 890 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 ZNF543Q08ER8 600 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 CAMK4Q16566 473 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 ABCB5Q2M3G0 1257 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 RBM26Q5T8P6 1007 aaKnown RBP17.6■□□□□ 0.41
SGCE-205ENST00000437425 PPP1R18Q6NYC8 613 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 SHISA4Q96DD7 197 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 SDF4Q9BRK5 362 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 ZMYND12Q9H0C1 365 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 DNAJC18Q9H819 358 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 PCDHAC2Q9Y5I4 1007 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 COL4A5P29400 1685 aa17.6■□□□□ 0.41
SGCE-205ENST00000437425 A0A1B0GVL5 298 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 USP17L5A8MUK1 530 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 STXBP3O00186 592 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 SYKP43405 635 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 NDUFA8P51970 172 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 HEATR3Q7Z4Q2 680 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 PPP1R9BQ96SB3 815 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
SGCE-205ENST00000437425 HPSEQ9Y251 543 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 SIPA1L1O43166 1804 aa17.59■□□□□ 0.41
SGCE-205ENST00000437425 CCDC194A0A1B0GVG4 234 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 NFKBIEO00221 500 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 ZNF202O95125 648 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 PFKFB1P16118 471 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 TTC38Q5R3I4 469 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 LRRC47Q8N1G4 583 aaKnown RBP17.58■□□□□ 0.41
SGCE-205ENST00000437425 GMCL1P1Q8NEA9 526 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 FAM200AQ8TCP9 573 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 DPF2Q92785 391 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.41
SGCE-205ENST00000437425 PYM1Q9BRP8 204 aaKnown RBP17.58■□□□□ 0.41
SGCE-205ENST00000437425 PANK2Q9BZ23 570 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 GLT8D2Q9H1C3 349 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 MTMR7Q9Y216 660 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 BCS1LQ9Y276 419 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 PCDHB6Q9Y5E3 794 aa17.58■□□□□ 0.41
SGCE-205ENST00000437425 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 PTGER2P43116 358 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 NAPAP54920 295 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 EIF6P56537 245 aaKnown RBP17.57■□□□□ 0.4
SGCE-205ENST00000437425 ZNF280AP59817 542 aaPredicted RBP17.57■□□□□ 0.4
SGCE-205ENST00000437425 ICA1Q05084 483 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 ORC2Q13416 577 aaPredicted RBP17.57■□□□□ 0.4
SGCE-205ENST00000437425 TNFAIP1Q13829 316 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
SGCE-205ENST00000437425 KRT25Q7Z3Z0 450 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.57■□□□□ 0.4
SGCE-205ENST00000437425 ANO10Q9NW15 660 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 FBXO2Q9UK22 296 aaPredicted RBP17.57■□□□□ 0.4
SGCE-205ENST00000437425 PNMA6FA0A0J9YX94 578 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 M0R2N6 131 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 LAD1O00515 517 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 STX1AQ16623 288 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 ARL6IP4Q66PJ3 421 aaKnown RBP17.57■□□□□ 0.4
SGCE-205ENST00000437425 KANK3Q6NY19 840 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 SHC4Q6S5L8 630 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 CKAP2LQ8IYA6 745 aa17.57■□□□□ 0.4
SGCE-205ENST00000437425 MYOZ2Q9NPC6 264 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms