RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 ANKRD1Q15327 319 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 CCDC96Q2M329 555 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 TREML2Q5T2D2 321 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
SKA2-202ENST00000437036 PTPN18Q99952 460 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 BEGAINQ9BUH8 593 aa17.21■□□□□ 0.35
SKA2-202ENST00000437036 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
SKA2-202ENST00000437036 IGF2BP3O00425 579 aaKnown RBP eCLIP17.2■□□□□ 0.34
SKA2-202ENST00000437036 DDAH1O94760 285 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 IKQ13123 557 aaPredicted RBP17.2■□□□□ 0.34
SKA2-202ENST00000437036 KIAA1755Q5JYT7 1200 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
SKA2-202ENST00000437036 CATSPERGQ6ZRH7 1159 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 BRF1Q92994 677 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 ALDH8A1Q9H2A2 487 aaPredicted RBP17.2■□□□□ 0.34
SKA2-202ENST00000437036 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
SKA2-202ENST00000437036 NAP1L2Q9ULW6 460 aaPredicted RBP17.2■□□□□ 0.34
SKA2-202ENST00000437036 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 KLF18A0A0U1RQI7 1052 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 PARP1P09874 1014 aaKnown RBP17.19■□□□□ 0.34
SKA2-202ENST00000437036 PDHBP11177 359 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 KIF5BP33176 963 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 TAF1CQ15572 869 aaPredicted RBP17.19■□□□□ 0.34
SKA2-202ENST00000437036 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
SKA2-202ENST00000437036 NUP133Q8WUM0 1156 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 CHMP4CQ96CF2 233 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 MAP3K14Q99558 947 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
SKA2-202ENST00000437036 AGXT2Q9BYV1 514 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 ASCC2Q9H1I8 757 aaPredicted RBP17.19■□□□□ 0.34
SKA2-202ENST00000437036 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 ZFYVE28Q9HCC9 887 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 HOXC10Q9NYD6 342 aa17.19■□□□□ 0.34
SKA2-202ENST00000437036 ZBTB43O43298 467 aa17.18■□□□□ 0.34
SKA2-202ENST00000437036 FLOT1O75955 427 aa17.18■□□□□ 0.34
SKA2-202ENST00000437036 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
SKA2-202ENST00000437036 ZNF543Q08ER8 600 aa17.18■□□□□ 0.34
SKA2-202ENST00000437036 COG2Q14746 738 aa17.18■□□□□ 0.34
SKA2-202ENST00000437036 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
SKA2-202ENST00000437036 GTF3C2Q8WUA4 911 aaPredicted RBP17.18■□□□□ 0.34
SKA2-202ENST00000437036 KIF2CQ99661 725 aa17.18■□□□□ 0.34
SKA2-202ENST00000437036 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 CA12O43570 354 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 ST18O60284 1047 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 PLA2G6O60733 806 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 GNAQP50148 359 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 STAT2P52630 851 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 RCAN1P53805 252 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 TROAPQ12815 778 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 APOA5Q6Q788 366 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 KCTD1Q719H9 257 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 CTDP1Q9Y5B0 961 aaPredicted RBP17.17■□□□□ 0.34
SKA2-202ENST00000437036 PTPRFP10586 1907 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 LOC285556D6RIA3 1793 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 FRMPD2Q68DX3 1309 aaPredicted RBP17.17■□□□□ 0.34
SKA2-202ENST00000437036 MYPNQ86TC9 1320 aa17.17■□□□□ 0.34
SKA2-202ENST00000437036 GOLGA8BA8MQT2 603 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 GCLCP48506 637 aaPredicted RBP17.16■□□□□ 0.34
SKA2-202ENST00000437036 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
SKA2-202ENST00000437036 GRM4Q14833 912 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 PPP2R5BQ15173 497 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
SKA2-202ENST00000437036 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 PRPF38AQ8NAV1 312 aaKnown RBP17.16■□□□□ 0.34
SKA2-202ENST00000437036 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
SKA2-202ENST00000437036 SLF1Q9BQI6 1058 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
SKA2-202ENST00000437036 THSD7BQ9C0I4 1608 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 CCDC196A0A1B0GTZ2 297 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 TRPA1O75762 1119 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 FDX1P10109 184 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 CYP2C8P10632 490 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 DSG3P32926 999 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 AK2P54819 239 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 HERVK_113P62684 666 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 FANCBQ8NB91 859 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 LZTS2Q9BRK4 669 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 MYL10Q9BUA6 226 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
SKA2-202ENST00000437036 PPP1R9AQ9ULJ8 1098 aa17.15■□□□□ 0.34
SKA2-202ENST00000437036 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
SKA2-202ENST00000437036 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
SKA2-202ENST00000437036 KLRF2D3W0D1 207 aa17.14■□□□□ 0.33
SKA2-202ENST00000437036 ZBED4O75132 1171 aa17.14■□□□□ 0.33
SKA2-202ENST00000437036 GOLGA8HP0CJ92 632 aa17.14■□□□□ 0.33
SKA2-202ENST00000437036 METAP2P50579 478 aaKnown RBP eCLIP17.14■□□□□ 0.33
SKA2-202ENST00000437036 EVCP57679 992 aa17.14■□□□□ 0.33
SKA2-202ENST00000437036 CRHR2Q13324 411 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms