RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
CALD1-208ENST00000435928 GOPCQ9HD26 462 aa18.87■□□□□ 0.61
CALD1-208ENST00000435928 ARPP21Q9UBL0 812 aaPredicted RBP18.87■□□□□ 0.61
CALD1-208ENST00000435928 MYH4Q9Y623 1939 aa18.87■□□□□ 0.61
CALD1-208ENST00000435928 SEPT4O43236 478 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 SMARCA5O60264 1052 aaPredicted RBP18.86■□□□□ 0.61
CALD1-208ENST00000435928 SLC25A27O95847 323 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 FCER1AP12319 257 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 RTP1P59025 263 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 TMEM132BQ14DG7 1078 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 GJC2Q5T442 439 aaPredicted RBP18.86■□□□□ 0.61
CALD1-208ENST00000435928 ANO1Q5XXA6 986 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 CTR9Q6PD62 1173 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 LBHD1Q9BQE6 289 aaPredicted RBP18.86■□□□□ 0.61
CALD1-208ENST00000435928 PUS7LQ9H0K6 701 aaKnown RBP18.86■□□□□ 0.61
CALD1-208ENST00000435928 PRKAG2Q9UGJ0 569 aa18.86■□□□□ 0.61
CALD1-208ENST00000435928 RAD21O60216 631 aa18.85■□□□□ 0.61
CALD1-208ENST00000435928 Q7L0L9 218 aa18.85■□□□□ 0.61
CALD1-208ENST00000435928 MAML3Q96JK9 1138 aa18.85■□□□□ 0.61
CALD1-208ENST00000435928 MYCNP04198 464 aaPredicted RBP18.84■□□□□ 0.61
CALD1-208ENST00000435928 C20orf194Q5TEA3 1177 aa18.84■□□□□ 0.61
CALD1-208ENST00000435928 MMP19Q99542 508 aa18.84■□□□□ 0.61
CALD1-208ENST00000435928 ECHDC1Q9NTX5 307 aa18.84■□□□□ 0.61
CALD1-208ENST00000435928 FBXO28Q9NVF7 368 aa18.84■□□□□ 0.61
CALD1-208ENST00000435928 ATP11BQ9Y2G3 1177 aa18.84■□□□□ 0.61
CALD1-208ENST00000435928 SMCHD1A6NHR9 2005 aa18.84■□□□□ 0.61
CALD1-208ENST00000435928 FAM83BQ5T0W9 1011 aa18.83■□□□□ 0.6
CALD1-208ENST00000435928 GPATCH3Q96I76 525 aa18.83■□□□□ 0.6
CALD1-208ENST00000435928 PPP1R9AQ9ULJ8 1098 aa18.83■□□□□ 0.6
CALD1-208ENST00000435928 ADAMTS5Q9UNA0 930 aa18.83■□□□□ 0.6
CALD1-208ENST00000435928 VWA5AO00534 786 aa18.82■□□□□ 0.6
CALD1-208ENST00000435928 KCTD2Q14681 263 aa18.82■□□□□ 0.6
CALD1-208ENST00000435928 PRAMEF19Q5SWL8 479 aa18.82■□□□□ 0.6
CALD1-208ENST00000435928 RIOX2Q8IUF8 465 aa18.82■□□□□ 0.6
CALD1-208ENST00000435928 STRBPQ96SI9 672 aaKnown RBP18.82■□□□□ 0.6
CALD1-208ENST00000435928 UNC80Q8N2C7 3258 aa18.82■□□□□ 0.6
CALD1-208ENST00000435928 ROBO3Q96MS0 1386 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 COPB2P35606 906 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 STAT3P40763 770 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 FAM47AQ5JRC9 791 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 SLC39A5Q6ZMH5 540 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 KBTBD3Q8NAB2 608 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 MTMR10Q9NXD2 777 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 NRBP1Q9UHY1 535 aa18.81■□□□□ 0.6
CALD1-208ENST00000435928 ZNF214Q9UL59 606 aaPredicted RBP18.81■□□□□ 0.6
CALD1-208ENST00000435928 PGK2P07205 417 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 RASA1P20936 1047 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 LRRC41Q15345 812 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 SBK1Q52WX2 424 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 GIMAP6Q6P9H5 292 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 STK11IPQ8N1F8 1099 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 APPBP2Q92624 585 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.8■□□□□ 0.6
CALD1-208ENST00000435928 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 PRDM5Q9NQX1 630 aaPredicted RBP18.8■□□□□ 0.6
CALD1-208ENST00000435928 STXBP5LQ9Y2K9 1186 aa18.8■□□□□ 0.6
CALD1-208ENST00000435928 GSG1L2A8MUP6 293 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 MINDY4BA8MYZ0 360 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 RARBP10826 455 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 ADCYAP1R1P41586 468 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 SNX17Q15036 470 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 TRIM60Q495X7 471 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 REPS2Q8NFH8 660 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 NUP88Q99567 741 aaPredicted RBP18.79■□□□□ 0.6
CALD1-208ENST00000435928 SLF1Q9BQI6 1058 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 TINF2Q9BSI4 451 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 XPNPEP3Q9NQH7 507 aa18.79■□□□□ 0.6
CALD1-208ENST00000435928 DIS3Q9Y2L1 958 aaKnown RBP18.79■□□□□ 0.6
CALD1-208ENST00000435928 ZNF792Q3KQV3 632 aa18.78■□□□□ 0.6
CALD1-208ENST00000435928 TSHZ3Q63HK5 1081 aa18.78■□□□□ 0.6
CALD1-208ENST00000435928 OSBP2Q969R2 916 aa18.78■□□□□ 0.6
CALD1-208ENST00000435928 FERMT2Q96AC1 680 aa18.78■□□□□ 0.6
CALD1-208ENST00000435928 TEX13BQ9BXU2 312 aa18.78■□□□□ 0.6
CALD1-208ENST00000435928 NYAP2Q9P242 653 aa18.78■□□□□ 0.6
CALD1-208ENST00000435928 DLL1O00548 723 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 RNF113AO15541 343 aaKnown RBP18.77■□□□□ 0.6
CALD1-208ENST00000435928 GPAA1O43292 621 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 ZFYP08048 801 aaPredicted RBP18.77■□□□□ 0.6
CALD1-208ENST00000435928 GNAT2P19087 354 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 TDO2P48775 406 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 SNRNP48Q6IEG0 339 aaKnown RBP18.77■□□□□ 0.6
CALD1-208ENST00000435928 RNF180Q86T96 592 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 DCTPP1Q9H773 170 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 EPB41L4AQ9HCS5 686 aaPredicted RBP18.77■□□□□ 0.6
CALD1-208ENST00000435928 PDLIM7Q9NR12 457 aa18.77■□□□□ 0.6
CALD1-208ENST00000435928 EYSQ5T1H1 3165 aa18.77■□□□□ 0.59
CALD1-208ENST00000435928 MCM3APO60318 1980 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 F5H6K3 240 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 NDUFB10O96000 172 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 AKR1A1P14550 325 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 KLRC3Q07444 240 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 C1orf53Q5VUE5 145 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 ZNF287Q9HBT7 754 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 PHF24Q9UPV7 400 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 CNPY2Q9Y2B0 182 aa18.76■□□□□ 0.59
CALD1-208ENST00000435928 PGK1P00558 417 aa18.75■□□□□ 0.59
CALD1-208ENST00000435928 APPP05067 770 aa18.75■□□□□ 0.59
CALD1-208ENST00000435928 TAL1P17542 331 aaPredicted RBP18.75■□□□□ 0.59
CALD1-208ENST00000435928 LRRFIP1Q32MZ4 808 aaKnown RBP18.75■□□□□ 0.59
CALD1-208ENST00000435928 FAM109BQ6ICB4 259 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms