RNA–Protein interactions for RNA: ENST00000435676.2

FAM78B-203, Transcript of family with sequence similarity 78 member B, humanhuman

TSL 2

Gene FAM78B, Length 4,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-203ENST00000435676 ZNF70Q9UC06 446 aaPredicted RBP10.36□□□□□ -0.75
FAM78B-203ENST00000435676 PNPLA7Q6ZV29 1317 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 BIN1O00499 593 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 LPXNO60711 386 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 CUTAO60888 179 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 SLF1Q9BQI6 1058 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 CCDC169A6NNP5 214 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 DDX39AO00148 427 aaKnown RBP10.36□□□□□ -0.75
FAM78B-203ENST00000435676 GCFC2P16383 781 aaKnown RBP10.36□□□□□ -0.75
FAM78B-203ENST00000435676 DNM1Q05193 864 aaKnown RBP10.36□□□□□ -0.75
FAM78B-203ENST00000435676 APOA5Q6Q788 366 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 GINS2Q9Y248 185 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 C19orf81C9J6K1 198 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 YEATS4O95619 227 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 USP8P40818 1118 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 SCARF1Q14162 830 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 EXOC8Q8IYI6 725 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 STAG1Q8WVM7 1258 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 CTAGE1Q96RT6 745 aa10.36□□□□□ -0.75
FAM78B-203ENST00000435676 ELP1O95163 1332 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 SYCE3A1L190 88 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 HOXA10P31260 410 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 GPS2Q13227 327 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 FMNL3Q8IVF7 1028 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 TBC1D5Q92609 795 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 NSUN4Q96CB9 384 aaKnown RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 ZBTB12Q9Y330 459 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L15C9J2P7 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L13C9JLJ4 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L11C9JVI0 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L18D6R9N7 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L22D6RA61 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L17D6RBQ6 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L19D6RCP7 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L20D6RJB6 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 SSR1P43307 286 aaKnown RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 ZNF157P51786 506 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 HUNKP57058 714 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 USP17L24Q0WX57 530 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 SNAPC2Q13487 334 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 KCTD1Q719H9 257 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 KIAA1328Q86T90 577 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 OSBPL5Q9H0X9 879 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 ZHX1Q9UKY1 873 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 CCND2P30279 289 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 SREBF2Q12772 1141 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 BMS1Q14692 1282 aaKnown RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 ZNF589Q86UQ0 364 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 ANKRD13AQ8IZ07 590 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 TAF4BQ92750 862 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 FHDC1Q9C0D6 1143 aaPredicted RBP10.35□□□□□ -0.75
FAM78B-203ENST00000435676 PPP2R3BQ9Y5P8 575 aa10.35□□□□□ -0.75
FAM78B-203ENST00000435676 EPHX2P34913 555 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 ADD1P35611 737 aaKnown RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 TNNT3P45378 269 aaPredicted RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 TDRD12Q587J7 1177 aaKnown RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 ZBTB8OSQ8IWT0 167 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 ATP6V0A1Q93050 837 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 SPAG5Q96R06 1193 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 KCNJ14Q9UNX9 436 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 SFPQP23246 707 aaKnown RBP eCLIP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 TAF12Q16514 161 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 PRR16Q569H4 304 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 RCSD1Q6JBY9 416 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 FILIP1Q7Z7B0 1213 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 FNBP1Q96RU3 617 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 WDR11Q9BZH6 1224 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 PUF60Q9UHX1 559 aaKnown RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 hCG_1642624A0A1W2PR95 340 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 N4BP3O15049 544 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 TRAPPC10P48553 1259 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 SEPT2Q15019 361 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 ZNF827Q17R98 1081 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 CNNM4Q6P4Q7 775 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 PRPF38AQ8NAV1 312 aaKnown RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 LPAR1Q92633 364 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 PARK7Q99497 189 aaKnown RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 SLIT3O75094 1523 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 ZNF142P52746 1687 aaPredicted RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 ZNF165P49910 485 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 TAF1CQ15572 869 aaPredicted RBP10.34□□□□□ -0.75
FAM78B-203ENST00000435676 MSANTD4Q8NCY6 345 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 FAM212AQ96EL1 285 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 PCDHA12Q9UN75 941 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 FRMD4BQ9Y2L6 1034 aa10.34□□□□□ -0.75
FAM78B-203ENST00000435676 CYP2D7A0A087X1C5 515 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 PNMA6FA0A0J9YX94 578 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 RCAN1P53805 252 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 NEDD1Q8NHV4 660 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 PSMD1Q99460 953 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 ZFYVE28Q9HCC9 887 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 COL3A1P02461 1466 aaPredicted RBP10.33□□□□□ -0.76
FAM78B-203ENST00000435676 SH2B2O14492 632 aaPredicted RBP10.33□□□□□ -0.76
FAM78B-203ENST00000435676 PDIA3P30101 505 aaKnown RBP10.33□□□□□ -0.76
FAM78B-203ENST00000435676 CDC37Q16543 378 aaPredicted RBP10.33□□□□□ -0.76
FAM78B-203ENST00000435676 NOSTRINQ8IVI9 506 aa10.33□□□□□ -0.76
FAM78B-203ENST00000435676 ZSWIM5Q9P217 1185 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms