RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 SMTNL1A8MU46 457 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 DDNO94850 711 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-209ENST00000433949 GNAQP50148 359 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 TCP10Q12799 353 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 NR5A1Q13285 461 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 SPC24Q8NBT2 197 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 CCDC34Q96HJ3 373 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 KAT14Q9H8E8 782 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 MKNK2Q9HBH9 465 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 SERPINA10Q9UK55 444 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 SRPRBQ9Y5M8 271 aaKnown RBP13.67□□□□□ -0.22
CTCFL-209ENST00000433949 PLEKHA8P1O95397 391 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 NFIAQ12857 509 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 DLGAP5Q15398 846 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 FAM47AQ5JRC9 791 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 SAMD7Q7Z3H4 446 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 AGBL3Q8NEM8 1001 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 ZDHHC15Q96MV8 337 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 VPS54Q9P1Q0 977 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 HDAC9Q9UKV0 1011 aa13.67□□□□□ -0.22
CTCFL-209ENST00000433949 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 MYH8P13535 1937 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 TRIM75PA6NK02 468 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 TFAP4Q01664 338 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 TBC1D10BQ4KMP7 808 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 KANK3Q6NY19 840 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 KRBA2Q6ZNG9 492 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 MICALL2Q8IY33 904 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 FAM177A1Q8N128 213 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 CNNM3Q8NE01 707 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 DDX4Q9NQI0 724 aaKnown RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 CLIP2Q9UDT6 1046 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 CNOT7Q9UIV1 285 aaKnown RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 FBXO2Q9UK22 296 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 IKBKBO14920 756 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 SCG2P13521 617 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 DPCR1Q3MIW9 517 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 AOPEPQ8N6M6 819 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-209ENST00000433949 CLIC6Q96NY7 704 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 SH3GLB2Q9NR46 395 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 PCDHB6Q9Y5E3 794 aa13.66□□□□□ -0.22
CTCFL-209ENST00000433949 GRIN3BO60391 1043 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 NEMFO60524 1076 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 NMT2O60551 498 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 TSPY3P0CV98 308 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 TSPY8P0CW00 308 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 CALML3P27482 149 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 TRAPPC10P48553 1259 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-209ENST00000433949 SRBD1Q8N5C6 995 aaKnown RBP13.65□□□□□ -0.22
CTCFL-209ENST00000433949 PNMA1Q8ND90 353 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 OXER1Q8TDS5 423 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 FERMT2Q96AC1 680 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 MYOZ2Q9NPC6 264 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
CTCFL-209ENST00000433949 TCP10L2B9ZVM9 353 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 TPM2P07951 284 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 DHX8Q14562 1220 aaKnown RBP13.64□□□□□ -0.23
CTCFL-209ENST00000433949 KIAA1524Q8TCG1 905 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 ERCC4Q92889 916 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-209ENST00000433949 VEZTQ9HBM0 779 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 FLT1P17948 1338 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 MYO1BO43795 1136 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 PLCD1P51178 756 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 HDLBPQ00341 1268 aaKnown RBP13.64□□□□□ -0.23
CTCFL-209ENST00000433949 CCDC186Q7Z3E2 898 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 KCNF1Q9H3M0 494 aa13.64□□□□□ -0.23
CTCFL-209ENST00000433949 EPS15P42566 896 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 GRM4Q14833 912 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 ZSCAN29Q8IWY8 852 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-209ENST00000433949 GPC2Q8N158 579 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 MRIQ9BWK5 157 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 ASTN2O75129 1339 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-209ENST00000433949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.63□□□□□ -0.23
CTCFL-209ENST00000433949 WNT10BO00744 389 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 PTGS1P23219 599 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 LONRF3Q496Y0 759 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 C16orf86Q6ZW13 317 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 METTL16Q86W50 562 aaKnown RBP13.63□□□□□ -0.23
CTCFL-209ENST00000433949 TNFRSF25Q93038 417 aa13.63□□□□□ -0.23
CTCFL-209ENST00000433949 NLRP5P59047 1200 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 NPY5RQ15761 445 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 GALNT17Q6IS24 598 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 SHISA4Q96DD7 197 aa13.62□□□□□ -0.23
CTCFL-209ENST00000433949 ZNF646O15015 1829 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms