RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 KRT23Q9C075 422 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL17A1-204ENST00000433822 WDR90Q96KV7 1748 aa8.63□□□□□ -1.03
COL17A1-204ENST00000433822 MYO5AQ9Y4I1 1855 aaKnown RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF532Q9HCE3 1301 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 KLF18A0A0U1RQI7 1052 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 GOLGA8BA8MQT2 603 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 CPLX1O14810 134 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 NEMFO60524 1076 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 KINO60870 393 aaKnown RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 PPP6R2O75170 966 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 NTSR2O95665 410 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 GPTP24298 496 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 PHKA1P46020 1223 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 CRKLP46109 303 aaKnown RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF165P49910 485 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 SIK1P57059 783 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 SF3B3Q15393 1217 aaKnown RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 TTLL5Q6EMB2 1281 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 FAM173BQ6P4H8 233 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 LYPD4Q6UWN0 246 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 MTERF4Q7Z6M4 381 aaKnown RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 PLA2G4DQ86XP0 818 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 JMYQ8N9B5 988 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 SPATA5Q8NB90 893 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 STAG1Q8WVM7 1258 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 MRPS27Q92552 414 aaKnown RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 WASF1Q92558 559 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 DDX11Q96FC9 970 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 C8orf76Q96K31 380 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 MAP7D2Q96T17 732 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 RNF41Q9H4P4 317 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF395Q9H8N7 513 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 CBX8Q9HC52 389 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ENAMQ9NRM1 1142 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ANO10Q9NW15 660 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ORC3Q9UBD5 711 aaPredicted RBP8.62□□□□□ -1.03
COL17A1-204ENST00000433822 ANAPC4Q9UJX5 808 aa8.62□□□□□ -1.03
COL17A1-204ENST00000433822 KIAA1551Q9HCM1 1747 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 DYNC1I1O14576 645 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 MYO1BO43795 1136 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 RRP9O43818 475 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 IGHMBP2P38935 993 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 CCT2P78371 535 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 KIF23Q02241 960 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 PTK2Q05397 1052 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 SNW1Q13573 536 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 UBE4AQ14139 1066 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 SLC10A5Q5PT55 438 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 APOA5Q6Q788 366 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 CCAR1Q8IX12 1150 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 FMR1NBQ8N0W7 255 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 KIAA1524Q8TCG1 905 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 AIDAQ96BJ3 306 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 MPHOSPH8Q99549 860 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 LRRC2Q9BYS8 371 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 NACAP1Q9BZK3 213 aa8.61□□□□□ -1.03
COL17A1-204ENST00000433822 NAT10Q9H0A0 1025 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 PIH1D3Q9NQM4 214 aaKnown RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF330Q9Y3S2 320 aaPredicted RBP8.61□□□□□ -1.03
COL17A1-204ENST00000433822 KAT6BQ8WYB5 2073 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 CELA2BP08218 269 aaPredicted RBP8.6□□□□□ -1.03
COL17A1-204ENST00000433822 IFNAR1P17181 557 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 CMA1P23946 247 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 U2AF2P26368 475 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL17A1-204ENST00000433822 GTF2F1P35269 517 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL17A1-204ENST00000433822 METAP2P50579 478 aaKnown RBP eCLIP8.6□□□□□ -1.03
COL17A1-204ENST00000433822 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
COL17A1-204ENST00000433822 IQCB1Q15051 598 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 SLFNL1Q499Z3 407 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 ANO6Q4KMQ2 910 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 AKNAD1Q5T1N1 836 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 TBC1D10CQ8IV04 446 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 NAPBQ9H115 298 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 NCOA5Q9HCD5 579 aaKnown RBP8.6□□□□□ -1.03
COL17A1-204ENST00000433822 KCND1Q9NSA2 647 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 GPSM3Q9Y4H4 160 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 MAST2Q6P0Q8 1798 aa8.6□□□□□ -1.03
COL17A1-204ENST00000433822 DLEC1Q9Y238 1755 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 A0A0G2JLW4 131 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 SPTLC2O15270 562 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 ZBTB43O43298 467 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 IDH1O75874 414 aaKnown RBP8.59□□□□□ -1.03
COL17A1-204ENST00000433822 ADH1AP07327 375 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 YBX3P16989 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL17A1-204ENST00000433822 ZNF75DP51815 510 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 PRELPP51888 382 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 NOLC1Q14978 699 aaKnown RBP eCLIP8.59□□□□□ -1.03
COL17A1-204ENST00000433822 SLC39A14Q15043 492 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 NTRK3Q16288 839 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 NBPF20Q3BBV1 942 aa8.59□□□□□ -1.03
COL17A1-204ENST00000433822 ANO1Q5XXA6 986 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms