RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 GSG1L2A8MUP6 293 aa19.37■□□□□ 0.69
ACTB-205ENST00000432588 RNF113AO15541 343 aaKnown RBP19.37■□□□□ 0.69
ACTB-205ENST00000432588 COBLO75128 1261 aa19.37■□□□□ 0.69
ACTB-205ENST00000432588 GNAT2P19087 354 aa19.37■□□□□ 0.69
ACTB-205ENST00000432588 OSBP2Q969R2 916 aa19.37■□□□□ 0.69
ACTB-205ENST00000432588 UBE2OQ9C0C9 1292 aaKnown RBP19.37■□□□□ 0.69
ACTB-205ENST00000432588 ZNF287Q9HBT7 754 aa19.37■□□□□ 0.69
ACTB-205ENST00000432588 ADAMTS5Q9UNA0 930 aa19.37■□□□□ 0.69
ACTB-205ENST00000432588 MINDY4BA8MYZ0 360 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 KBTBD13C9JR72 458 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 SOX1O00570 391 aaPredicted RBP19.36■□□□□ 0.69
ACTB-205ENST00000432588 SEPT4O43236 478 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 COPB2P35606 906 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 TDO2P48775 406 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 TSHZ3Q63HK5 1081 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 TDHQ8IZJ6 230 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 LRCH3Q96II8 777 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 FBXO28Q9NVF7 368 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 PPP1R9AQ9ULJ8 1098 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 FRMPD3Q5JV73 1810 aa19.36■□□□□ 0.69
ACTB-205ENST00000432588 ROBO3Q96MS0 1386 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 VWA5AO00534 786 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 ERC2O15083 957 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 GPAA1O43292 621 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 APPP05067 770 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 RASA1P20936 1047 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 STAT3P40763 770 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 KCTD2Q14681 263 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 RIOX2Q8IUF8 465 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 STK11IPQ8N1F8 1099 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 MAML3Q96JK9 1138 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 MMP19Q99542 508 aa19.35■□□□□ 0.69
ACTB-205ENST00000432588 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.35■□□□□ 0.69
ACTB-205ENST00000432588 TTC41PQ6P2S7 1318 aa19.34■□□□□ 0.69
ACTB-205ENST00000432588 ATN1P54259 1190 aaPredicted RBP19.34■□□□□ 0.69
ACTB-205ENST00000432588 LRIT3Q3SXY7 679 aa19.34■□□□□ 0.69
ACTB-205ENST00000432588 GPR153Q6NV75 609 aa19.34■□□□□ 0.69
ACTB-205ENST00000432588 LBHD1Q9BQE6 289 aaPredicted RBP19.34■□□□□ 0.69
ACTB-205ENST00000432588 NYAP2Q9P242 653 aa19.34■□□□□ 0.69
ACTB-205ENST00000432588 PRKAG2Q9UGJ0 569 aa19.34■□□□□ 0.69
ACTB-205ENST00000432588 MYCNP04198 464 aaPredicted RBP19.33■□□□□ 0.68
ACTB-205ENST00000432588 GJC2Q5T442 439 aaPredicted RBP19.33■□□□□ 0.68
ACTB-205ENST00000432588 ZNF444Q8N0Y2 327 aaPredicted RBP19.33■□□□□ 0.68
ACTB-205ENST00000432588 SLF1Q9BQI6 1058 aa19.33■□□□□ 0.68
ACTB-205ENST00000432588 NACAP1Q9BZK3 213 aa19.33■□□□□ 0.68
ACTB-205ENST00000432588 NRBP1Q9UHY1 535 aa19.33■□□□□ 0.68
ACTB-205ENST00000432588 PATL2C9JE40 543 aaKnown RBP19.32■□□□□ 0.68
ACTB-205ENST00000432588 F5H6K3 240 aa19.32■□□□□ 0.68
ACTB-205ENST00000432588 MDM2Q00987 491 aaPredicted RBP19.32■□□□□ 0.68
ACTB-205ENST00000432588 KLRC3Q07444 240 aa19.32■□□□□ 0.68
ACTB-205ENST00000432588 PRAMEF19Q5SWL8 479 aa19.32■□□□□ 0.68
ACTB-205ENST00000432588 ANO1Q5XXA6 986 aa19.32■□□□□ 0.68
ACTB-205ENST00000432588 EPB41L4AQ9HCS5 686 aaPredicted RBP19.32■□□□□ 0.68
ACTB-205ENST00000432588 ZNF214Q9UL59 606 aaPredicted RBP19.32■□□□□ 0.68
ACTB-205ENST00000432588 DIS3Q9Y2L1 958 aaKnown RBP19.32■□□□□ 0.68
ACTB-205ENST00000432588 PARP14Q460N5 1801 aa19.32■□□□□ 0.68
ACTB-205ENST00000432588 M0R2C6 588 aa19.31■□□□□ 0.68
ACTB-205ENST00000432588 NDUFB10O96000 172 aa19.31■□□□□ 0.68
ACTB-205ENST00000432588 PGK2P07205 417 aa19.31■□□□□ 0.68
ACTB-205ENST00000432588 RTP1P59025 263 aa19.31■□□□□ 0.68
ACTB-205ENST00000432588 PRPF38AQ8NAV1 312 aaKnown RBP19.31■□□□□ 0.68
ACTB-205ENST00000432588 NUP88Q99567 741 aaPredicted RBP19.31■□□□□ 0.68
ACTB-205ENST00000432588 TEX13BQ9BXU2 312 aa19.31■□□□□ 0.68
ACTB-205ENST00000432588 CLIP2Q9UDT6 1046 aa19.31■□□□□ 0.68
ACTB-205ENST00000432588 CTDP1Q9Y5B0 961 aaPredicted RBP19.31■□□□□ 0.68
ACTB-205ENST00000432588 GREB1LQ9C091 1923 aaPredicted RBP19.3■□□□□ 0.68
ACTB-205ENST00000432588 SLC3A2P08195 630 aaKnown RBP19.3■□□□□ 0.68
ACTB-205ENST00000432588 RARBP10826 455 aa19.3■□□□□ 0.68
ACTB-205ENST00000432588 REPS2Q8NFH8 660 aa19.3■□□□□ 0.68
ACTB-205ENST00000432588 TINF2Q9BSI4 451 aa19.3■□□□□ 0.68
ACTB-205ENST00000432588 FSD1Q9BTV5 496 aa19.3■□□□□ 0.68
ACTB-205ENST00000432588 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
ACTB-205ENST00000432588 SYNPO2Q9UMS6 1093 aa19.3■□□□□ 0.68
ACTB-205ENST00000432588 ATP11BQ9Y2G3 1177 aa19.3■□□□□ 0.68
ACTB-205ENST00000432588 PRDM1O75626 825 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 PDE4BQ07343 736 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 ZNF792Q3KQV3 632 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 SLC39A5Q6ZMH5 540 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 IFNL3Q8IZI9 196 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 PI4K2BQ8TCG2 481 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 XPNPEP3Q9NQH7 507 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 PCDHB15Q9Y5E8 787 aa19.29■□□□□ 0.68
ACTB-205ENST00000432588 COL11A1P12107 1806 aaPredicted RBP19.29■□□□□ 0.68
ACTB-205ENST00000432588 IGKV6D-41A0A0C4DH26 115 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 ZBED4O75132 1171 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 TTLL1O95922 423 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 LRRC41Q15345 812 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 SNRNP48Q6IEG0 339 aaKnown RBP19.28■□□□□ 0.68
ACTB-205ENST00000432588 DEFB123Q8N688 67 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 MKL1Q969V6 931 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 DDX11Q96FC9 970 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 NAPBQ9H115 298 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 MTMR4Q9NYA4 1195 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 FEM1BQ9UK73 627 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 CNPY2Q9Y2B0 182 aa19.28■□□□□ 0.68
ACTB-205ENST00000432588 ATP2A1O14983 1001 aa19.27■□□□□ 0.68
ACTB-205ENST00000432588 TSPY3P0CV98 308 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms