RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 EHD4Q9H223 541 aa19.33■□□□□ 0.68
NUP50-209ENST00000432340 C11orf16Q9NQ32 467 aa19.33■□□□□ 0.68
NUP50-209ENST00000432340 FAM184BQ9ULE4 1060 aa19.33■□□□□ 0.68
NUP50-209ENST00000432340 YBX2Q9Y2T7 364 aaKnown RBP19.33■□□□□ 0.68
NUP50-209ENST00000432340 SLC4A7Q9Y6M7 1214 aa19.33■□□□□ 0.68
NUP50-209ENST00000432340 COPB2P35606 906 aa19.32■□□□□ 0.68
NUP50-209ENST00000432340 KCTD2Q14681 263 aa19.32■□□□□ 0.68
NUP50-209ENST00000432340 TTC6Q86TZ1 520 aa19.32■□□□□ 0.68
NUP50-209ENST00000432340 RPUSD2Q8IZ73 545 aaKnown RBP19.32■□□□□ 0.68
NUP50-209ENST00000432340 PPP1R12CQ9BZL4 782 aa19.32■□□□□ 0.68
NUP50-209ENST00000432340 ATAD5Q96QE3 1844 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 ZNF236Q9UL36 1845 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 FAM86C2PA6NEL3 165 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 ARVCFO00192 962 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 ALADP13716 330 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 KCNA10Q16322 511 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 MMP19Q99542 508 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 SEZ6LQ9BYH1 1024 aa19.31■□□□□ 0.68
NUP50-209ENST00000432340 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
NUP50-209ENST00000432340 CST5P28325 142 aaPredicted RBP19.3■□□□□ 0.68
NUP50-209ENST00000432340 ARID4AP29374 1257 aaPredicted RBP19.3■□□□□ 0.68
NUP50-209ENST00000432340 CDK7P50613 346 aa19.3■□□□□ 0.68
NUP50-209ENST00000432340 KLHDC9Q8NEP7 349 aa19.3■□□□□ 0.68
NUP50-209ENST00000432340 ACER1Q8TDN7 264 aa19.3■□□□□ 0.68
NUP50-209ENST00000432340 MTCH2Q9Y6C9 303 aa19.3■□□□□ 0.68
NUP50-209ENST00000432340 SYNRGQ9UMZ2 1314 aa19.29■□□□□ 0.68
NUP50-209ENST00000432340 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
NUP50-209ENST00000432340 ZNF865P0CJ78 1059 aaPredicted RBP19.29■□□□□ 0.68
NUP50-209ENST00000432340 UIMC1Q96RL1 719 aa19.29■□□□□ 0.68
NUP50-209ENST00000432340 PA2G4Q9UQ80 394 aaKnown RBP19.29■□□□□ 0.68
NUP50-209ENST00000432340 FLOT1O75955 427 aa19.28■□□□□ 0.68
NUP50-209ENST00000432340 TMEM67Q5HYA8 995 aa19.28■□□□□ 0.68
NUP50-209ENST00000432340 OTOP2Q7RTS6 562 aa19.28■□□□□ 0.68
NUP50-209ENST00000432340 MRPL50Q8N5N7 158 aaKnown RBP19.28■□□□□ 0.68
NUP50-209ENST00000432340 HIPK3Q9H422 1215 aa19.28■□□□□ 0.68
NUP50-209ENST00000432340 SH2D4AQ9H788 454 aa19.28■□□□□ 0.68
NUP50-209ENST00000432340 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
NUP50-209ENST00000432340 ATP2A2P16615 1042 aaKnown RBP19.27■□□□□ 0.68
NUP50-209ENST00000432340 DSG3P32926 999 aa19.27■□□□□ 0.68
NUP50-209ENST00000432340 USP5P45974 858 aa19.27■□□□□ 0.68
NUP50-209ENST00000432340 NHLH1Q02575 133 aa19.27■□□□□ 0.68
NUP50-209ENST00000432340 PI16Q6UXB8 463 aa19.27■□□□□ 0.68
NUP50-209ENST00000432340 FAM126BQ8IXS8 530 aa19.27■□□□□ 0.68
NUP50-209ENST00000432340 MYO9BQ13459 2157 aa19.27■□□□□ 0.68
NUP50-209ENST00000432340 ASGR1P07306 291 aa19.26■□□□□ 0.67
NUP50-209ENST00000432340 PFKMP08237 780 aa19.26■□□□□ 0.67
NUP50-209ENST00000432340 C6orf222P0C671 652 aaPredicted RBP19.26■□□□□ 0.67
NUP50-209ENST00000432340 CYP2C18P33260 490 aa19.26■□□□□ 0.67
NUP50-209ENST00000432340 FOXK2Q01167 660 aa19.26■□□□□ 0.67
NUP50-209ENST00000432340 TFCP2Q12800 502 aa19.26■□□□□ 0.67
NUP50-209ENST00000432340 CCSAPQ6IQ19 270 aaPredicted RBP19.26■□□□□ 0.67
NUP50-209ENST00000432340 ZBBXA8MT70 800 aa19.25■□□□□ 0.67
NUP50-209ENST00000432340 RABGGTBP53611 331 aa19.25■□□□□ 0.67
NUP50-209ENST00000432340 ZNF792Q3KQV3 632 aa19.25■□□□□ 0.67
NUP50-209ENST00000432340 KIF28PB7ZC32 967 aa19.24■□□□□ 0.67
NUP50-209ENST00000432340 CABYRO75952 493 aa19.24■□□□□ 0.67
NUP50-209ENST00000432340 TAL1P17542 331 aaPredicted RBP19.24■□□□□ 0.67
NUP50-209ENST00000432340 MCAMP43121 646 aa19.24■□□□□ 0.67
NUP50-209ENST00000432340 GNASQ5JWF2 1037 aa19.24■□□□□ 0.67
NUP50-209ENST00000432340 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
NUP50-209ENST00000432340 RIOX2Q8IUF8 465 aa19.24■□□□□ 0.67
NUP50-209ENST00000432340 GJD3Q8N144 294 aa19.24■□□□□ 0.67
NUP50-209ENST00000432340 ZHX1Q9UKY1 873 aaPredicted RBP19.24■□□□□ 0.67
NUP50-209ENST00000432340 PGK2P07205 417 aa19.23■□□□□ 0.67
NUP50-209ENST00000432340 LENG1Q96BZ8 264 aaPredicted RBP19.23■□□□□ 0.67
NUP50-209ENST00000432340 CDCA7LQ96GN5 454 aa19.23■□□□□ 0.67
NUP50-209ENST00000432340 MPHOSPH10O00566 681 aaKnown RBP19.22■□□□□ 0.67
NUP50-209ENST00000432340 CD4P01730 458 aa19.22■□□□□ 0.67
NUP50-209ENST00000432340 ACTN1P12814 892 aa19.22■□□□□ 0.67
NUP50-209ENST00000432340 SSTR3P32745 418 aaPredicted RBP19.22■□□□□ 0.67
NUP50-209ENST00000432340 CCDC158Q5M9N0 1113 aa19.22■□□□□ 0.67
NUP50-209ENST00000432340 ATG4CQ96DT6 458 aa19.22■□□□□ 0.67
NUP50-209ENST00000432340 ARHGEF10LQ9HCE6 1279 aa19.22■□□□□ 0.67
NUP50-209ENST00000432340 CA3P07451 260 aa19.21■□□□□ 0.67
NUP50-209ENST00000432340 STAT3P40763 770 aa19.21■□□□□ 0.67
NUP50-209ENST00000432340 SEPT2Q15019 361 aa19.21■□□□□ 0.67
NUP50-209ENST00000432340 PHOSPHO2Q8TCD6 241 aa19.21■□□□□ 0.67
NUP50-209ENST00000432340 KHSRPQ92945 711 aaKnown RBP eCLIP19.21■□□□□ 0.67
NUP50-209ENST00000432340 LMCD1Q9NZU5 365 aa19.21■□□□□ 0.67
NUP50-209ENST00000432340 TCF20Q9UGU0 1960 aaKnown RBP19.21■□□□□ 0.67
NUP50-209ENST00000432340 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
NUP50-209ENST00000432340 SRGAP3O43295 1099 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 MYOGP15173 224 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 GJA9P57773 515 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 TMEM132BQ14DG7 1078 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 TTC39AQ5SRH9 613 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 MAMDC4Q6UXC1 1216 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 TMEM179Q6ZVK1 233 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 DDX11Q96FC9 970 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 FBXL18Q96ME1 805 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 SLC9A7Q96T83 725 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 UPF3AQ9H1J1 476 aaKnown RBP19.2■□□□□ 0.66
NUP50-209ENST00000432340 ABHD16BQ9H3Z7 469 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
NUP50-209ENST00000432340 ST18O60284 1047 aa19.19■□□□□ 0.66
NUP50-209ENST00000432340 ZEB2O60315 1214 aa19.19■□□□□ 0.66
NUP50-209ENST00000432340 CYP7A1P22680 504 aa19.19■□□□□ 0.66
NUP50-209ENST00000432340 SHMT1P34896 483 aa19.19■□□□□ 0.66
NUP50-209ENST00000432340 PUS10Q3MIT2 529 aaKnown RBP19.19■□□□□ 0.66
NUP50-209ENST00000432340 SAMD1Q6SPF0 538 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms