RNA–Protein interactions for RNA: ENST00000432012.1

NIPAL3-205, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 2,714 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-205ENST00000432012 PIP5K1CO60331 668 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 INHAP05111 366 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 HSP90AA1P07900 732 aaKnown RBP7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 CNGA1P29973 690 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 INO80DQ53TQ3 878 aaPredicted RBP7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 SEC16BQ96JE7 1060 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 CEP89Q96ST8 783 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 COL5A3P25940 1745 aaPredicted RBP7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 NRXN2Q9P2S2 1712 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 RRP9O43818 475 aaKnown RBP7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 EXOSC9Q06265 439 aaKnown RBP7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 ERAP2Q6P179 960 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 SSH1Q8WYL5 1049 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 TNPO1Q92973 898 aaKnown RBP7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 GBP4Q96PP9 640 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 TMEM260Q9NX78 707 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 HCN4Q9Y3Q4 1203 aa7.32□□□□□ -1.24
NIPAL3-205ENST00000432012 TBX3O15119 743 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 GPSM2P81274 684 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 ITPK1Q13572 414 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 IL31Q6EBC2 164 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 PIGBQ92521 554 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 LRCH3Q96II8 777 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 TMOD3Q9NYL9 352 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 FRMD4BQ9Y2L6 1034 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 ERBB4Q15303 1308 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 POLRMTO00411 1230 aaKnown RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 NEK3P51956 506 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 LSM11P83369 360 aaKnown RBP eCLIP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 EXOSC10Q01780 885 aaKnown RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 NUCB1Q02818 461 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 HSP90AA2PQ14568 343 aaPredicted RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 RAB3GAP1Q15042 981 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 CCDC93Q567U6 631 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 MYRIPQ8NFW9 859 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 TRIM44Q96DX7 344 aaPredicted RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 CASS4Q9NQ75 786 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 ZBTB40Q9NUA8 1239 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 HPS5Q9UPZ3 1129 aa7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.31□□□□□ -1.24
NIPAL3-205ENST00000432012 PCNTO95613 3336 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 MYCP01106 439 aaPredicted RBP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 HSP90AB1P08238 724 aaKnown RBP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 TM4SF1P30408 202 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 PBX2P40425 430 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 SKOR2Q2VWA4 1001 aaPredicted RBP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 TMEM57Q8N5G2 664 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 ZNF296Q8WUU4 475 aaPredicted RBP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 FRMD6Q96NE9 622 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 PLEKHF1Q96S99 279 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 FEZ1Q99689 392 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 MSRB2Q9Y3D2 182 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 KIF16BQ96L93 1317 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 USP42Q9H9J4 1324 aaKnown RBP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 KDRP35968 1356 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 hCG_1984214I3L0E3 225 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 AOC2O75106 756 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 TMPOP42166 694 aaKnown RBP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 FOXK2Q01167 660 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 MAP3K10Q02779 954 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 MCL1Q07820 350 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 DDR1Q08345 913 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 DDX42Q86XP3 938 aaKnown RBP eCLIP7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 C2CD5Q86YS7 1000 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 E2F7Q96AV8 911 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 PLD4Q96BZ4 506 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 IL16Q14005 1332 aa7.3□□□□□ -1.24
NIPAL3-205ENST00000432012 IRS4O14654 1257 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CPNE3O75131 537 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 NR1I2O75469 434 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 EIF4A3P38919 411 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 GRM1Q13255 1194 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 BMP2KLQ5H9B9 411 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 INTS6LQ5JSJ4 861 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 MAP1SQ66K74 1059 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 GAS2L3Q86XJ1 694 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 SHDQ96IW2 340 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CDC5LQ99459 802 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 TNKS2Q9H2K2 1166 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 GJA3Q9Y6H8 435 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 IPO8O15397 1037 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 HRO43593 1189 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 NBNO60934 754 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 RNASEH2AO75792 299 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 ASMTLO95671 621 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CBX2Q14781 532 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 INTS3Q68E01 1043 aaKnown RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CHD1LQ86WJ1 897 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 HOMER1Q86YM7 354 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 LTV1Q96GA3 475 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 KCTD15Q96SI1 283 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 SPSB2Q99619 263 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 COL3A1P02461 1466 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 ARFGEF2Q9Y6D5 1785 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 GBP2P32456 591 aaPredicted RBP7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 COPB2P35606 906 aa7.29□□□□□ -1.24
NIPAL3-205ENST00000432012 MMP16P51512 607 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms