RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 PPP2R5AQ15172 486 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 HADHQ16836 314 aaKnown RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 GPATCH4Q5T3I0 446 aaKnown RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 HELBQ8NG08 1087 aaPredicted RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 MRPL44Q9H9J2 332 aaKnown RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 STK17AQ9UEE5 414 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 HYOU1Q9Y4L1 999 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 IGSF1Q8N6C5 1336 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 USP6P35125 1406 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 ARHGEF37A1IGU5 675 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 ZNF189O75820 626 aaPredicted RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 PRPF6O94906 941 aaKnown RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 OR52Z1P0C646 297 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 GJC1P36383 396 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 IL6STP40189 918 aaPredicted RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 ORC2Q13416 577 aaPredicted RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 TFDP1Q14186 410 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 BEND3Q5T5X7 828 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 GBP6Q6ZN66 633 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 NEK8Q86SG6 692 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 LMNTD2Q8IXW0 634 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 TBC1D31Q96DN5 1066 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 VCX3BQ9H321 246 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 CTTNBP2NLQ9P2B4 639 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 ABCC12Q96J65 1359 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 TNNC2P02585 160 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 ZAP70P43403 619 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 ARHGEF6Q15052 776 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 HERC4Q5GLZ8 1057 aaPredicted RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 LARGE2Q8N3Y3 721 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 SPC25Q9HBM1 224 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 ZNF277Q9NRM2 450 aaPredicted RBP7.77□□□□□ -1.17
CPS1-203ENST00000430249 REREQ9P2R6 1566 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 XDHP47989 1333 aa7.77□□□□□ -1.17
CPS1-203ENST00000430249 DAPK3O43293 454 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 XPOTO43592 962 aaKnown RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 NR1I2O75469 434 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 TRMT2AQ8IZ69 625 aaKnown RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 IFNL3Q8IZI9 196 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 AATFQ9NY61 560 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPS1-203ENST00000430249 SCG2P13521 617 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 TCP1P17987 556 aaKnown RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 CHST3Q7LGC8 479 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 PHLDB2Q86SQ0 1253 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 RAB3IPQ96QF0 476 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 PPP1R9BQ96SB3 815 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 HAUS4Q9H6D7 363 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.76□□□□□ -1.173e-6■■■■■ 29.3
CPS1-203ENST00000430249 LMBRD1Q9NUN5 540 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 CROCC2H7BZ55 1655 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 SMCO2A6NFE2 343 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 GAS7O60861 476 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 PPFIA3O75145 1194 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 GCNT3O95395 438 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 XRCC5P13010 732 aaKnown RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 RCAN1P53805 252 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 TSC1Q92574 1164 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 RNF26Q9BY78 433 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 TRIM6Q9C030 488 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 NRBP2Q9NSY0 501 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 RAB20Q9NX57 234 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 SLAIN2Q9P270 581 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 RNF14Q9UBS8 474 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 WDR19Q8NEZ3 1342 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 CARMIL3Q8ND23 1372 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 MYCNP04198 464 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 POLR2BP30876 1174 aaKnown RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 BAG6P46379 1132 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 TPD52P55327 224 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 TFAP4Q01664 338 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 CUL4BQ13620 913 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 TSNAXIP1Q2TAA8 658 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 PEX26Q7Z412 305 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 DEPTORQ8TB45 409 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 DHTKD1Q96HY7 919 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 FAM227BQ96M60 508 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 MTA3Q9BTC8 594 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 VPS16Q9H269 839 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 KIAA1468Q9P260 1216 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 NFE2L3Q9Y4A8 694 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 UNC13BO14795 1591 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 KCNJ18B7U540 433 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 GIPC1O14908 333 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 FMNL1O95466 1100 aaPredicted RBP7.76□□□□□ -1.17
CPS1-203ENST00000430249 RHOXF2BP0C7M4 288 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 STAT1P42224 750 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 TIMM10P62072 90 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 MORC3Q14149 939 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 KCNJ12Q14500 433 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 SPATA1Q5VX52 437 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 SND1Q7KZF4 910 aaKnown RBP eCLIP7.76□□□□□ -1.17
CPS1-203ENST00000430249 OR8K1Q8NGG5 319 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 CCHCR1Q8TD31 782 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 UBE2Q2Q8WVN8 375 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 RNF34Q969K3 372 aa7.76□□□□□ -1.17
CPS1-203ENST00000430249 RHOXF2Q9BQY4 288 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms