RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 RAPGEF1Q13905 1077 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 CABP7Q86V35 215 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
CPNE4-201ENST00000429747 LY9Q9HBG7 655 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 GSTO1P78417 241 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 NUP58Q9BVL2 599 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 IFIH1Q9BYX4 1025 aaKnown RBP14.12□□□□□ -0.15
CPNE4-201ENST00000429747 TSGA10Q9BZW7 698 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
CPNE4-201ENST00000429747 TADA3O75528 432 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 ANKRD13CQ8N6S4 541 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 SENP2Q9HC62 589 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 NLRC4Q9NPP4 1024 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 MROH7-TTC4A0A0A0MT08 1334 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 GOLGA6L7A0A1B0GV03 622 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 NCAPH2Q6IBW4 605 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 CNNM4Q6P4Q7 775 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 ABCB6Q9NP58 842 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 CCDC87Q9NVE4 849 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 PARP1P09874 1014 aaKnown RBP14.12□□□□□ -0.15
CPNE4-201ENST00000429747 RRAGAQ7L523 313 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 OTUD6BQ8N6M0 293 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 DYDC1Q8WWB3 177 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 PANX2Q96RD6 677 aa14.12□□□□□ -0.15
CPNE4-201ENST00000429747 EIF6P56537 245 aaKnown RBP14.11□□□□□ -0.15
CPNE4-201ENST00000429747 NDUFAB1O14561 156 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 MFAP3LO75121 409 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 PLEKHA8P1O95397 391 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 DNM2P50570 870 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 NONOQ15233 471 aaKnown RBP eCLIP14.11□□□□□ -0.15
CPNE4-201ENST00000429747 B4DLN1 442 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 FMR1Q06787 632 aaKnown RBP eCLIP14.11□□□□□ -0.15
CPNE4-201ENST00000429747 KRT31Q15323 416 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 GOLGA5Q8TBA6 731 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 FAM204AQ9H8W3 233 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 LRWD1Q9UFC0 647 aa14.11□□□□□ -0.15
CPNE4-201ENST00000429747 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 PNMA1Q8ND90 353 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 ADAM21Q9UKJ8 722 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 GOLGA8HP0CJ92 632 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 HPDP32754 393 aaPredicted RBP14.1□□□□□ -0.15
CPNE4-201ENST00000429747 RAD51AP2Q09MP3 1159 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 USP49Q70CQ1 688 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 SLF2Q8IX21 1173 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 TBC1D7Q9P0N9 293 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 HPS5Q9UPZ3 1129 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 TMEM94Q12767 1356 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 PIGBQ92521 554 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 IL17RAQ96F46 866 aa14.1□□□□□ -0.15
CPNE4-201ENST00000429747 WDR17Q8IZU2 1322 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 GPCPD1Q9NPB8 672 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 GDAQ9Y2T3 454 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 ACTN2P35609 894 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 IFI16Q16666 785 aaKnown RBP14.09□□□□□ -0.15
CPNE4-201ENST00000429747 TPTE2Q6XPS3 522 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 MAPKAPK5Q8IW41 473 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 TUBGCP2Q9BSJ2 902 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 SELENOOQ9BVL4 669 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 TUBE1Q9UJT0 475 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 ADGRG1Q9Y653 693 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 UBE2Q2LH0YL09 131 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 TECP42680 631 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 FAM71BQ8TC56 605 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 SNX29Q8TEQ0 813 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 NOX5Q96PH1 765 aa14.09□□□□□ -0.15
CPNE4-201ENST00000429747 TBCAO75347 108 aaKnown RBP14.08□□□□□ -0.15
CPNE4-201ENST00000429747 CYP27A1Q02318 531 aa14.08□□□□□ -0.15
CPNE4-201ENST00000429747 CASP8Q14790 479 aa14.08□□□□□ -0.15
CPNE4-201ENST00000429747 NELFCDQ8IXH7 590 aa14.08□□□□□ -0.15
CPNE4-201ENST00000429747 TEX11Q8IYF3 940 aa14.08□□□□□ -0.15
CPNE4-201ENST00000429747 ISCA1Q9BUE6 129 aa14.08□□□□□ -0.15
CPNE4-201ENST00000429747 SLC39A2Q9NP94 309 aa14.08□□□□□ -0.15
CPNE4-201ENST00000429747 GIMAP7Q8NHV1 300 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
CPNE4-201ENST00000429747 PRDM4Q9UKN5 801 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 NDUFA10O95299 355 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 PPP1R2P41236 205 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 SSR1P43307 286 aaKnown RBP14.08□□□□□ -0.16
CPNE4-201ENST00000429747 KLHL7Q8IXQ5 586 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 TGFBRAP1Q8WUH2 860 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 EXOC4Q96A65 974 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 ANKRD2Q9GZV1 360 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 WDR19Q8NEZ3 1342 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 ANKRD65E5RJM6 399 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 ZBTB22O15209 634 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 RFC4P35249 363 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 GRIN1Q05586 938 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 DCAF17Q5H9S7 520 aaPredicted RBP14.08□□□□□ -0.16
CPNE4-201ENST00000429747 MEX3CQ5U5Q3 659 aaKnown RBP14.08□□□□□ -0.16
CPNE4-201ENST00000429747 RPGRIP1Q96KN7 1286 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 MRFAP1Q9Y605 127 aa14.08□□□□□ -0.16
CPNE4-201ENST00000429747 NPHP4O75161 1426 aaPredicted RBP14.07□□□□□ -0.16
CPNE4-201ENST00000429747 FAM170AA1A519 330 aa14.07□□□□□ -0.16
CPNE4-201ENST00000429747 SMCO2A6NFE2 343 aa14.07□□□□□ -0.16
CPNE4-201ENST00000429747 LONP1P36776 959 aaKnown RBP14.07□□□□□ -0.16
CPNE4-201ENST00000429747 KCNJ6P48051 423 aa14.07□□□□□ -0.16
CPNE4-201ENST00000429747 TNNC1P63316 161 aa14.07□□□□□ -0.16
CPNE4-201ENST00000429747 CUL4BQ13620 913 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms