RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	KANSL2	Q9H9L4	492 aa		21.23	■□□□□ 0.99
MRPL28-203	ENST00000429738	HOXC10	Q9NYD6	342 aa		21.23	■□□□□ 0.99
MRPL28-203	ENST00000429738	EEF2	P13639	858 aa	Known RBP	21.22	■□□□□ 0.99
MRPL28-203	ENST00000429738	CNGA1	P29973	690 aa		21.22	■□□□□ 0.99
MRPL28-203	ENST00000429738	YTHDC1	Q96MU7	727 aa	Known RBP	21.22	■□□□□ 0.99
MRPL28-203	ENST00000429738	TANGO6	Q9C0B7	1094 aa		21.22	■□□□□ 0.99
MRPL28-203	ENST00000429738	IVNS1ABP	Q9Y6Y0	642 aa		21.22	■□□□□ 0.99
MRPL28-203	ENST00000429738	ZNF236	Q9UL36	1845 aa		21.21	■□□□□ 0.99
MRPL28-203	ENST00000429738	WDR46	O15213	610 aa	Known RBP	21.21	■□□□□ 0.99
MRPL28-203	ENST00000429738	DSG3	P32926	999 aa		21.21	■□□□□ 0.99
MRPL28-203	ENST00000429738	GRB14	Q14449	540 aa		21.21	■□□□□ 0.99
MRPL28-203	ENST00000429738	SEC62	Q99442	399 aa	Known RBP	21.21	■□□□□ 0.99
MRPL28-203	ENST00000429738	FRMPD3	Q5JV73	1810 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	PATL2	C9JE40	543 aa	Known RBP	21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	DNM1L	O00429	736 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	IGHA2	P01877	340 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	RASA1	P20936	1047 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	ATN1	P54259	1190 aa	Predicted RBP	21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	AAMP	Q13685	434 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	ZMYM1	Q5SVZ6	1142 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	ANKRD45	Q5TZF3	282 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	SPICE1	Q8N0Z3	855 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	MB21D1	Q8N884	522 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	NPLOC4	Q8TAT6	608 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	MOV10L1	Q9BXT6	1211 aa	Known RBP	21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	UNC80	Q8N2C7	3258 aa		21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	COL11A1	P12107	1806 aa	Predicted RBP	21.2	■□□□□ 0.98
MRPL28-203	ENST00000429738	MINDY4B	A8MYZ0	360 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	CYP2C19	P33261	490 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	IFNL3	Q8IZI9	196 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	TRPV1	Q8NER1	839 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	GUCD1	Q96NT3	240 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	FSD1	Q9BTV5	496 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	SPATC1L	Q9H0A9	340 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	PRKAG2	Q9UGJ0	569 aa		21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	LAMA2	P24043	3122 aa	Known RBP	21.19	■□□□□ 0.98
MRPL28-203	ENST00000429738	MYH4	Q9Y623	1939 aa		21.18	■□□□□ 0.98
MRPL28-203	ENST00000429738	FLOT1	O75955	427 aa		21.18	■□□□□ 0.98
MRPL28-203	ENST00000429738	ARRDC4	Q8NCT1	418 aa		21.18	■□□□□ 0.98
MRPL28-203	ENST00000429738	SHCBP1	Q8NEM2	672 aa		21.18	■□□□□ 0.98
MRPL28-203	ENST00000429738	ATG4C	Q96DT6	458 aa		21.18	■□□□□ 0.98
MRPL28-203	ENST00000429738	ADAMTS5	Q9UNA0	930 aa		21.18	■□□□□ 0.98
MRPL28-203	ENST00000429738	IGKV6D-41	A0A0C4DH26	115 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	STRN	O43815	780 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	TDO2	P48775	406 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	RTP1	P59025	263 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	DPP9	Q86TI2	863 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	COL25A1	Q9BXS0	654 aa	Predicted RBP	21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	MKNK2	Q9HBH9	465 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	NYAP2	Q9P242	653 aa		21.17	■□□□□ 0.98
MRPL28-203	ENST00000429738	CYBA	P13498	195 aa		21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	PDE1A	P54750	535 aa		21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	OLFML2B	Q68BL8	750 aa		21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	STK11IP	Q8N1F8	1099 aa		21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	GOPC	Q9HD26	462 aa		21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	ZBTB47	Q9UFB7	747 aa	Predicted RBP	21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	ZNFX1	Q9P2E3	1918 aa	Known RBP	21.16	■□□□□ 0.98
MRPL28-203	ENST00000429738	FOXP2	O15409	715 aa		21.15	■□□□□ 0.98
MRPL28-203	ENST00000429738	APP	P05067	770 aa		21.15	■□□□□ 0.98
MRPL28-203	ENST00000429738	ERCC3	P19447	782 aa		21.15	■□□□□ 0.98
MRPL28-203	ENST00000429738	GJC2	Q5T442	439 aa	Predicted RBP	21.15	■□□□□ 0.98
MRPL28-203	ENST00000429738	FAM161B	Q96MY7	647 aa		21.15	■□□□□ 0.98
MRPL28-203	ENST00000429738	NACAP1	Q9BZK3	213 aa		21.15	■□□□□ 0.98
MRPL28-203	ENST00000429738	PLIN4	Q96Q06	1357 aa		21.14	■□□□□ 0.98
MRPL28-203	ENST00000429738	ADORA2A	P29274	412 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	TMEM132B	Q14DG7	1078 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	ZNF697	Q5TEC3	545 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	SLC39A5	Q6ZMH5	540 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	SMC5	Q8IY18	1101 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	EVI5L	Q96CN4	794 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	MROH8	Q9H579	483 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	ZNF287	Q9HBT7	754 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	FBXO28	Q9NVF7	368 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	ATP11B	Q9Y2G3	1177 aa		21.14	■□□□□ 0.97
MRPL28-203	ENST00000429738	PRDM1	O75626	825 aa		21.13	■□□□□ 0.97
MRPL28-203	ENST00000429738	ABRA	Q8N0Z2	381 aa		21.13	■□□□□ 0.97
MRPL28-203	ENST00000429738	REPS2	Q8NFH8	660 aa		21.13	■□□□□ 0.97
MRPL28-203	ENST00000429738	MKL1	Q969V6	931 aa		21.13	■□□□□ 0.97
MRPL28-203	ENST00000429738	NAPB	Q9H115	298 aa		21.13	■□□□□ 0.97
MRPL28-203	ENST00000429738	PPP1R9A	Q9ULJ8	1098 aa		21.13	■□□□□ 0.97
MRPL28-203	ENST00000429738	KBTBD13	C9JR72	458 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738		F5H6K3	240 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	SEPT4	O43236	478 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	KLRC3	Q07444	240 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	PPARA	Q07869	468 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	SHH	Q15465	462 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	FAM83B	Q5T0W9	1011 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	TICAM2	Q86XR7	235 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	ZNF444	Q8N0Y2	327 aa	Predicted RBP	21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	SLC5A4	Q9NY91	659 aa		21.12	■□□□□ 0.97
MRPL28-203	ENST00000429738	VWA5A	O00534	786 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	COBL	O75128	1261 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	PLS1	Q14651	629 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	ANO1	Q5XXA6	986 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	CCDC129	Q6ZRS4	1044 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	NEDD1	Q8NHV4	660 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	CEP95	Q96GE4	821 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	MTMR4	Q9NYA4	1195 aa		21.11	■□□□□ 0.97
MRPL28-203	ENST00000429738	ZNF214	Q9UL59	606 aa	Predicted RBP	21.11	■□□□□ 0.97

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms