RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 SH3RF1Q7Z6J0 888 aa15.58■□□□□ 0.08
THBS3-202ENST00000428962 VSTM4Q8IW00 320 aa15.58■□□□□ 0.08
THBS3-202ENST00000428962 GSDMAQ96QA5 445 aa15.58■□□□□ 0.08
THBS3-202ENST00000428962 PCDHA4Q9UN74 947 aa15.58■□□□□ 0.08
THBS3-202ENST00000428962 VWA3AA6NCI4 1184 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 TOP1P11387 765 aaKnown RBP15.57■□□□□ 0.08
THBS3-202ENST00000428962 MAPKAPK5Q8IW41 473 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 TEX11Q8IYF3 940 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 GRAMD1CQ8IYS0 662 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 DAGLBQ8NCG7 672 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
THBS3-202ENST00000428962 PAGE5Q96GU1 130 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 EPSTI1Q96J88 318 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 GPR101Q96P66 508 aaPredicted RBP15.57■□□□□ 0.08
THBS3-202ENST00000428962 NFE2L3Q9Y4A8 694 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 CDK5RAP2Q96SN8 1893 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 RGPD3A6NKT7 1758 aaPredicted RBP15.57■□□□□ 0.08
THBS3-202ENST00000428962 RGPD4Q7Z3J3 1758 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 TUBB4AP04350 444 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 RASA1P20936 1047 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 CDK11BP21127 795 aaKnown RBP15.57■□□□□ 0.08
THBS3-202ENST00000428962 TXLNAP40222 546 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 GRIK5Q16478 980 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 C16orf86Q6ZW13 317 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 IQUBQ8NA54 791 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 MAD2L2Q9UI95 211 aa15.57■□□□□ 0.08
THBS3-202ENST00000428962 A0A087X0B3 334 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 USP17L3A6NCW0 530 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 USP17L4A6NCW7 530 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 CTIFO43310 598 aaKnown RBP15.56■□□□□ 0.08
THBS3-202ENST00000428962 ZNF18P17022 549 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 LONP1P36776 959 aaKnown RBP15.56■□□□□ 0.08
THBS3-202ENST00000428962 MFSD14BQ5SR56 506 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 USP17L1Q7RTZ2 530 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 SAP30BPQ9UHR5 308 aaKnown RBP15.56■□□□□ 0.08
THBS3-202ENST00000428962 STX8Q9UNK0 236 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 GAKO14976 1311 aa15.56■□□□□ 0.08
THBS3-202ENST00000428962 SNED1Q8TER0 1413 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 CCDC194A0A1B0GVG4 234 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 WNT7AO00755 349 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 MCM7P33993 719 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 SYCP1Q15431 976 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 NOM1Q5C9Z4 860 aaKnown RBP15.55■□□□□ 0.08
THBS3-202ENST00000428962 SLC51AQ86UW1 340 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 TBC1D16Q8TBP0 767 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 CCDC12Q8WUD4 166 aaPredicted RBP15.55■□□□□ 0.08
THBS3-202ENST00000428962 DPF2Q92785 391 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 EYA3Q99504 573 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 TMEM47Q9BQJ4 181 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 FLT1P17948 1338 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 FAM205AQ6ZU69 1335 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 LTBP1Q14766 1721 aa15.55■□□□□ 0.08
THBS3-202ENST00000428962 USP27XA6NNY8 438 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 AFMP43652 599 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 CDK8P49336 464 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 FMR1Q06787 632 aaKnown RBP eCLIP15.54■□□□□ 0.08
THBS3-202ENST00000428962 DPYDQ12882 1025 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 ZNF827Q17R98 1081 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 STAG2Q8N3U4 1231 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 NEDD1Q8NHV4 660 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 SPZ1Q9BXG8 430 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 SYNRGQ9UMZ2 1314 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 KLRG2A4D1S0 409 aaPredicted RBP15.54■□□□□ 0.08
THBS3-202ENST00000428962 PALM3A6NDB9 673 aaPredicted RBP15.54■□□□□ 0.08
THBS3-202ENST00000428962 POLRMTO00411 1230 aaKnown RBP15.54■□□□□ 0.08
THBS3-202ENST00000428962 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
THBS3-202ENST00000428962 FCHSD1Q86WN1 690 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 SLC44A5Q8NCS7 719 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 KIF18AQ8NI77 898 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 GPKOWQ92917 476 aaPredicted RBP eCLIP15.54■□□□□ 0.08
THBS3-202ENST00000428962 TRMT1Q9NXH9 659 aaKnown RBP15.54■□□□□ 0.08
THBS3-202ENST00000428962 BARHL2Q9NY43 387 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 SUGT1Q9Y2Z0 365 aa15.54■□□□□ 0.08
THBS3-202ENST00000428962 FOCADQ5VW36 1801 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 C6orf229H3BNL8 230 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 LAD1O00515 517 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 SMARCA1P28370 1054 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 DDR1Q08345 913 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 E2F4Q16254 413 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 SPATA1Q5VX52 437 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 E4F1Q66K89 784 aaPredicted RBP15.53■□□□□ 0.08
THBS3-202ENST00000428962 WWC2Q6AWC2 1192 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 HEATR3Q7Z4Q2 680 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 SP8Q8IXZ3 490 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 ZNF592Q92610 1267 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 RMND1Q9NWS8 449 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 POLLQ9UGP5 575 aa15.53■□□□□ 0.08
THBS3-202ENST00000428962 MYH1P12882 1939 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 M0R2N6 131 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 STXBP3O00186 592 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 GTPBP6O43824 516 aaPredicted RBP15.52■□□□□ 0.08
THBS3-202ENST00000428962 PARP1P09874 1014 aaKnown RBP15.52■□□□□ 0.08
THBS3-202ENST00000428962 SPECC1LQ69YQ0 1117 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 TRMT44Q8IYL2 757 aaKnown RBP15.52■□□□□ 0.08
THBS3-202ENST00000428962 PPP1R13BQ96KQ4 1090 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 COA1Q9GZY4 146 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 STK32BQ9NY57 414 aa15.52■□□□□ 0.08
THBS3-202ENST00000428962 KLRF2D3W0D1 207 aa15.52■□□□□ 0.07
THBS3-202ENST00000428962 RHBDL3P58872 404 aa15.52■□□□□ 0.07
THBS3-202ENST00000428962 CTAGE1Q96RT6 745 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms